An Innovative eDNA Sampler for Deep-Sea Ecosystem Exploration

This paper presents the development of a novel automated in situ eDNA multi-sampler specifically designed for deep-sea exploration at depths of up to 6,000 meters. The device is optimized for deployment on remotely operated vehicles (ROVs), such as the VICTOR 6000 operated by the French Oceanographic Fleet. It addresses key technical challenges, including ensuring sample representativeness and reproducibility, preventing contamination, and preserving eDNA integrity throughout prolonged deep-sea dives. First, we provide a review of existing commercial eDNA samplers and their characteristics. We then detail the design of our custom-built eDNA sampler, the DSN-eDNA-S, with a focus on critical component choices (e.g., the pump system). The performance of the prototype is currently under evaluation.

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Publication Details

Published
2025-06-16
DOI
https://doi.org/10.1109/oceans58557.2025.11104781
Citations
1
Primary Topic
Environmental DNA in Biodiversity Studies
Type
article
Field-Weighted Citation Impact
1.72
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An Innovative eDNA Sampler for Deep-Sea Ecosystem Exploration

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article en
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Abstract

This paper presents the development of a novel automated in situ eDNA multi-sampler specifically designed for deep-sea exploration at depths of up to 6,000 meters. The device is optimized for deployment on remotely operated vehicles (ROVs), such as the VICTOR 6000 operated by the French Oceanographic Fleet. It addresses key technical challenges, including ensuring sample representativeness and reproducibility, preventing contamination, and preserving eDNA integrity throughout prolonged deep-sea dives. First, we provide a review of existing commercial eDNA samplers and their characteristics. We then detail the design of our custom-built eDNA sampler, the DSN-eDNA-S, with a focus on critical component choices (e.g., the pump system). The performance of the prototype is currently under evaluation.

Centre National de la Recherche Scientifique (FR), Ifremer (FR), Aix-Marseille Université (FR), Institut de Recherche pour le Développement (FR)
Life below water
Openalex Percentile: Top 15%
Environmental DNA in Biodiversity Studies
1.72
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