Exome Sequencing in Adults with Unexplained Liver Disease: Diagnostic Yield and Clinical Impact

<b>Background:</b> The etiology of liver disease remains unidentified in approximately 30% of patients, presenting a persistent diagnostic challenge. While whole-exome sequencing (WES) is well established for identifying rare genetic conditions in pediatric populations, its utility in adult hepatology is less defined. This study aimed to evaluate the diagnostic value of WES in adults with unexplained liver disorder. <b>Methods:</b> Fifty-three Turkish adult patients with idiopathic liver disease underwent a comprehensive clinical evaluation and WES at Gazi University Ankara in 2024-2025. The cohort included individuals with idiopathic cholestasis (6/53, 11%), hepatic steatosis (28/53, 53%), unexplained elevated liver enzymes (12/53, 23%), and cryptogenic cirrhosis (7/53, 13%). All patients had inconclusive results from prior standard investigations. <b>Results:</b> ES yielded a definitive molecular diagnosis in 11% (6/53) of cases. Definitive diagnoses were distributed across the following disease categories: idiopathic cholestasis (<i>n</i> = 1), hepatic steatosis (<i>n</i> = 1), elevated liver enzymes (<i>n</i> = 2), and cryptogenic cirrhosis (<i>n</i> = 2). Pathogenic variants were detected in the <i>ABCB4</i>, <i>AGL</i>, <i>APOB</i>, <i>CP</i>, and <i>MTTP</i> genes. One patient was identified with mosaic Turner syndrome. <b>Conclusions:</b> This study highlights the role of rare genetic variants in the etiology of unexplained liver disease in adults. Integrating whole-exome sequencing into hepatology practice can uncover novel disease mechanisms and improve diagnostic yield, informing more precise patient care.

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Publication Details

Journal
Diagnostics
Published
2025-08-11
DOI
https://doi.org/10.3390/diagnostics15162010
Citations
1
Primary Topic
Liver Disease Diagnosis and Treatment
Type
article
Field-Weighted Citation Impact
1.35
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article

Exome Sequencing in Adults with Unexplained Liver Disease: Diagnostic Yield and Clinical Impact

Nergiz Ekmen, Tarik Duzenli, Sinan Sarı, Gülsüm Kayhan et al.
1 citations
Diagnostics
Liver Disease Diagnosis and Treatment
1.35
article

Exome Sequencing in Adults with Unexplained Liver Disease: Diagnostic Yield and Clinical Impact

Nergiz Ekmen, Tarik Duzenli, Sinan Sarı, Gülsüm Kayhan, Kenan Moral, Mehmet Cindoruk
article en
1 citations

Abstract

<b>Background:</b> The etiology of liver disease remains unidentified in approximately 30% of patients, presenting a persistent diagnostic challenge. While whole-exome sequencing (WES) is well established for identifying rare genetic conditions in pediatric populations, its utility in adult hepatology is less defined. This study aimed to evaluate the diagnostic value of WES in adults with unexplained liver disorder. <b>Methods:</b> Fifty-three Turkish adult patients with idiopathic liver disease underwent a comprehensive clinical evaluation and WES at Gazi University Ankara in 2024-2025. The cohort included individuals with idiopathic cholestasis (6/53, 11%), hepatic steatosis (28/53, 53%), unexplained elevated liver enzymes (12/53, 23%), and cryptogenic cirrhosis (7/53, 13%). All patients had inconclusive results from prior standard investigations. <b>Results:</b> ES yielded a definitive molecular diagnosis in 11% (6/53) of cases. Definitive diagnoses were distributed across the following disease categories: idiopathic cholestasis (<i>n</i> = 1), hepatic steatosis (<i>n</i> = 1), elevated liver enzymes (<i>n</i> = 2), and cryptogenic cirrhosis (<i>n</i> = 2). Pathogenic variants were detected in the <i>ABCB4</i>, <i>AGL</i>, <i>APOB</i>, <i>CP</i>, and <i>MTTP</i> genes. One patient was identified with mosaic Turner syndrome. <b>Conclusions:</b> This study highlights the role of rare genetic variants in the etiology of unexplained liver disease in adults. Integrating whole-exome sequencing into hepatology practice can uncover novel disease mechanisms and improve diagnostic yield, informing more precise patient care.

DiagnosticsVol. 15(16)
Tulane University (US), Gazi University (TR)
Openalex Percentile: Top 17%
Liver Disease Diagnosis and Treatment
1.35
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