Arginine dynamics probed by magic-angle spinning NMR with a specific isotope-labeling scheme
The specific introduction of <sup>1</sup>H-<sup>13</sup>C or <sup>1</sup>H-<sup>15</sup>N moieties into otherwise deuterated proteins holds great potential for high-resolution solution and magic-angle spinning (MAS) NMR studies of protein structure and dynamics. Arginine residues play key roles for example at active sites of enzymes. Taking advantage of a chemically synthesized Arg with a <sup>13</sup>C-<sup>1</sup>H<sub>2</sub> group in an otherwise deuterated backbone, we demonstrate here the usefulness of proton-detected MAS NMR approaches to probe arginine dynamics. In experiments with crystalline ubiquitin and the 134 kDa tetrameric enzyme malate dehydrogenase we detected a wide range of motions, from sites that are rigid on time scales of at least tens of milliseconds to residues undergoing predominantly nanosecond motions. Spin-relaxation and dipolar-coupling measurements enabled quantitative determination of these dynamics. We observed microsecond dynamics of residue Arg54 in crystalline ubiquitin, whose backbone is known to sample different β-turn conformations on this time scale. The labeling scheme and experiments presented here expand the toolkit for high-resolution proton-detected MAS NMR.
Authors
- Roman J. Lichtenecker (ORCID: https://orcid.org/0000-0003-2168-5216)
- Federico Napoli (ORCID: https://orcid.org/0000-0002-9043-136X)
- Ben P. Tatman (ORCID: https://orcid.org/0000-0001-8176-2688)
- Paul Schanda (ORCID: https://orcid.org/0000-0002-9350-7606)
- Darja I. Rohden
- Anna Kapitonova (ORCID: https://orcid.org/0009-0002-0204-8529)
Institutions
- Institute of Science and Technology Austria (AT)
Publication Details
- Journal
- Journal of Molecular Biology
- Published
- 2025-08-12
- DOI
- https://doi.org/10.1016/j.jmb.2025.169379
- Citations
- 1
- Primary Topic
- Advanced NMR Techniques and Applications
- Type
- article
- Field-Weighted Citation Impact
- 0.76
Funders
- Austrian Science Fund