Arginine dynamics probed by magic-angle spinning NMR with a specific isotope-labeling scheme

The specific introduction of <sup>1</sup>H-<sup>13</sup>C or <sup>1</sup>H-<sup>15</sup>N moieties into otherwise deuterated proteins holds great potential for high-resolution solution and magic-angle spinning (MAS) NMR studies of protein structure and dynamics. Arginine residues play key roles for example at active sites of enzymes. Taking advantage of a chemically synthesized Arg with a <sup>13</sup>C-<sup>1</sup>H<sub>2</sub> group in an otherwise deuterated backbone, we demonstrate here the usefulness of proton-detected MAS NMR approaches to probe arginine dynamics. In experiments with crystalline ubiquitin and the 134 kDa tetrameric enzyme malate dehydrogenase we detected a wide range of motions, from sites that are rigid on time scales of at least tens of milliseconds to residues undergoing predominantly nanosecond motions. Spin-relaxation and dipolar-coupling measurements enabled quantitative determination of these dynamics. We observed microsecond dynamics of residue Arg54 in crystalline ubiquitin, whose backbone is known to sample different β-turn conformations on this time scale. The labeling scheme and experiments presented here expand the toolkit for high-resolution proton-detected MAS NMR.

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Publication Details

Journal
Journal of Molecular Biology
Published
2025-08-12
DOI
https://doi.org/10.1016/j.jmb.2025.169379
Citations
1
Primary Topic
Advanced NMR Techniques and Applications
Type
article
Field-Weighted Citation Impact
0.76

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article

Arginine dynamics probed by magic-angle spinning NMR with a specific isotope-labeling scheme

Roman J. Lichtenecker, Federico Napoli, Ben P. Tatman, Paul Schanda et al.
1 citations
Journal of Molecular Biology
Advanced NMR Techniques and Applications
0.76
article

Arginine dynamics probed by magic-angle spinning NMR with a specific isotope-labeling scheme

Roman J. Lichtenecker, Federico Napoli, Ben P. Tatman, Paul Schanda, Darja I. Rohden, Anna Kapitonova
article en
1 citations

Abstract

The specific introduction of <sup>1</sup>H-<sup>13</sup>C or <sup>1</sup>H-<sup>15</sup>N moieties into otherwise deuterated proteins holds great potential for high-resolution solution and magic-angle spinning (MAS) NMR studies of protein structure and dynamics. Arginine residues play key roles for example at active sites of enzymes. Taking advantage of a chemically synthesized Arg with a <sup>13</sup>C-<sup>1</sup>H<sub>2</sub> group in an otherwise deuterated backbone, we demonstrate here the usefulness of proton-detected MAS NMR approaches to probe arginine dynamics. In experiments with crystalline ubiquitin and the 134 kDa tetrameric enzyme malate dehydrogenase we detected a wide range of motions, from sites that are rigid on time scales of at least tens of milliseconds to residues undergoing predominantly nanosecond motions. Spin-relaxation and dipolar-coupling measurements enabled quantitative determination of these dynamics. We observed microsecond dynamics of residue Arg54 in crystalline ubiquitin, whose backbone is known to sample different β-turn conformations on this time scale. The labeling scheme and experiments presented here expand the toolkit for high-resolution proton-detected MAS NMR.

Journal of Molecular BiologyVol. 437(23)
Institute of Science and Technology Austria (AT)
Austrian Science Fund
Openalex Percentile: Top 27%
Advanced NMR Techniques and Applications
0.76
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