Quantum Descriptor-Based Machine-Learning Modeling of Thermal Hazard of Cyclic Sulfamidates

Cyclic sulfamidates are commonly used building blocks in organic synthesis. Correct classification of their thermal criticality is crucial for the safe use of these compounds in process development and scale-up. In this study, building on our earlier work (Ferrari et al., 2022), we focused on modeling the reaction enthalpy of a family of 5-membered cyclic sulfamidates toward strong bases. The key challenge for the modeling task was the sparse availability of measured reaction enthalpies, with only 29 measurements available. To address this challenge, we used descriptors based on the quantum-chemical properties of the molecules, as they are more closely related to reaction enthalpies than typical cheminformatics-based descriptors. This approach allowed us to avoid relying solely on data-to-fit models and to focus instead on modeling reaction enthalpies using chemistry-aware techniques, which are more appropriate for small data sets. Three models were constructed using the quantum-chemical descriptors: the first one combining Partial Least Squares (PLS) regression with a Genetic Algorithm (GA), the second one based on the Least Absolute Shrinkage and Selection Operator (LASSO) method, and last, a Gaussian Process Regression (GPR) model. The three models achieved coefficients of determination of 0.78, 0.67, and 0.74, respectively. Although the absolute prediction error values were close to 100 J/g, it is noteworthy that all three techniques provided similar results and accurately classified nearly all compounds into their respective thermal criticality classes. This highlights the methodology's effectiveness in providing a reliable framework for preliminary safety assessment and decision-making in process development.

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Publication Details

Journal
Journal of Chemical Information and Modeling
Published
2025-08-15
DOI
https://doi.org/10.1021/acs.jcim.5c01048
Citations
2
Primary Topic
Computational Drug Discovery Methods
Type
article
Field-Weighted Citation Impact
3.01
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article

Quantum Descriptor-Based Machine-Learning Modeling of Thermal Hazard of Cyclic Sulfamidates

Anikó Udvarhelyi, Roger Martí, Michaël Parmentier, Michal Dabros et al.
2 citations
Journal of Chemical Information and Modeling
Computational Drug Discovery Methods
3.01
article

Quantum Descriptor-Based Machine-Learning Modeling of Thermal Hazard of Cyclic Sulfamidates

Anikó Udvarhelyi, Roger Martí, Michaël Parmentier, Michal Dabros, Florence Yerly, Hagen Münkler
article en
2 citations

Abstract

Cyclic sulfamidates are commonly used building blocks in organic synthesis. Correct classification of their thermal criticality is crucial for the safe use of these compounds in process development and scale-up. In this study, building on our earlier work (Ferrari et al., 2022), we focused on modeling the reaction enthalpy of a family of 5-membered cyclic sulfamidates toward strong bases. The key challenge for the modeling task was the sparse availability of measured reaction enthalpies, with only 29 measurements available. To address this challenge, we used descriptors based on the quantum-chemical properties of the molecules, as they are more closely related to reaction enthalpies than typical cheminformatics-based descriptors. This approach allowed us to avoid relying solely on data-to-fit models and to focus instead on modeling reaction enthalpies using chemistry-aware techniques, which are more appropriate for small data sets. Three models were constructed using the quantum-chemical descriptors: the first one combining Partial Least Squares (PLS) regression with a Genetic Algorithm (GA), the second one based on the Least Absolute Shrinkage and Selection Operator (LASSO) method, and last, a Gaussian Process Regression (GPR) model. The three models achieved coefficients of determination of 0.78, 0.67, and 0.74, respectively. Although the absolute prediction error values were close to 100 J/g, it is noteworthy that all three techniques provided similar results and accurately classified nearly all compounds into their respective thermal criticality classes. This highlights the methodology's effectiveness in providing a reliable framework for preliminary safety assessment and decision-making in process development.

Journal of Chemical Information and ModelingVol. 65(16)
Novartis (Switzerland) (CH), Institute of Chemical Technology (IN), HES-SO University of Applied Sciences and Arts Western Switzerland (CH), School of Engineering and Architecture of Fribourg (CH), HES-SO Fribourg (CH)
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Openalex Percentile: Top 8%
Computational Drug Discovery Methods
3.01
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