Is Tl<sup>+</sup> an Analogue of K<sup>+</sup>? IR Spectroscopy of Tl<sup>+</sup> and a Key Peptide of the Selectivity Filter in K<sup>+</sup> Channels

Elemental substitution of K<sup>+</sup> with Tl<sup>+</sup> is a powerful method for enhancing the structural analysis of biomolecules because of significant enhancement of sensitivity. Its validity has been explained by their similar physical properties; however, the chemical analogy between K<sup>+</sup> and Tl<sup>+</sup> is still under debate. This is of prime importance in K<sup>+</sup> channels because of the controversy on the translocation mechanism of K<sup>+</sup> provoked by single-crystal X-ray diffraction using Tl<sup>+</sup> as a replacement. Here, we have applied cryogenic ion trap infrared laser spectroscopy to a key part of the K<sup>+</sup> channel to address the question of chemical similarity between Tl<sup>+</sup> and K<sup>+</sup> where the conformational distribution of the ion-peptide complexes correlates with ion permeability. The conformations of Tl<sup>+</sup> with a partial peptide of the K<sup>+</sup> channel selectivity filter were revealed by combining vibrational spectroscopy and quantum chemical calculations. Upon K<sup>+</sup> → Tl<sup>+</sup> substitution, there is a change in the conformer population distributions, significantly different from permeable K<sup>+</sup>, but very close to that of impermeable Na<sup>+</sup>. This suggests that substantial differences may exist for the interactions of Tl<sup>+</sup> and K<sup>+</sup> in the K<sup>+</sup> channel selectivity filter. This difference is rationalized by the changes in the ion-peptide interaction, as directly revealed from the vibrational spectra. The fundamental differences between Tl<sup>+</sup> and the peptide indicate that the chemical behavior of Tl<sup>+</sup> does not necessarily replicate that of K<sup>+</sup>, highlighting the need for caution in utilizing elemental substitution of K<sup>+</sup> by Tl<sup>+</sup> in spectroscopic and crystallographic analyses.

Authors

Institutions

Publication Details

Journal
The Journal of Physical Chemistry Letters
Published
2025-08-14
DOI
https://doi.org/10.1021/acs.jpclett.5c01660
Citations
2
Primary Topic
Ion channel regulation and function
Type
article
Field-Weighted Citation Impact
1.61

Funders

Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Is Tl+ an Analogue of K+? IR Spectroscopy of Tl+ and a Key Peptide of the Selectivity Filter in K+ Channels

Satoru Tanabe, Masaaki Fujii, Keisuke Hirata, Shun‐ichi Ishiuchi et al.
2 citations
The Journal of Physical Chemistry Letters
Ion channel regulation and function
1.61
article

Is Tl+ an Analogue of K+? IR Spectroscopy of Tl+ and a Key Peptide of the Selectivity Filter in K+ Channels

Satoru Tanabe, Masaaki Fujii, Keisuke Hirata, Shun‐ichi Ishiuchi, Koichi Tsukiyama∥, James M. Lisy
article en
2 citations

Abstract

Elemental substitution of K<sup>+</sup> with Tl<sup>+</sup> is a powerful method for enhancing the structural analysis of biomolecules because of significant enhancement of sensitivity. Its validity has been explained by their similar physical properties; however, the chemical analogy between K<sup>+</sup> and Tl<sup>+</sup> is still under debate. This is of prime importance in K<sup>+</sup> channels because of the controversy on the translocation mechanism of K<sup>+</sup> provoked by single-crystal X-ray diffraction using Tl<sup>+</sup> as a replacement. Here, we have applied cryogenic ion trap infrared laser spectroscopy to a key part of the K<sup>+</sup> channel to address the question of chemical similarity between Tl<sup>+</sup> and K<sup>+</sup> where the conformational distribution of the ion-peptide complexes correlates with ion permeability. The conformations of Tl<sup>+</sup> with a partial peptide of the K<sup>+</sup> channel selectivity filter were revealed by combining vibrational spectroscopy and quantum chemical calculations. Upon K<sup>+</sup> → Tl<sup>+</sup> substitution, there is a change in the conformer population distributions, significantly different from permeable K<sup>+</sup>, but very close to that of impermeable Na<sup>+</sup>. This suggests that substantial differences may exist for the interactions of Tl<sup>+</sup> and K<sup>+</sup> in the K<sup>+</sup> channel selectivity filter. This difference is rationalized by the changes in the ion-peptide interaction, as directly revealed from the vibrational spectra. The fundamental differences between Tl<sup>+</sup> and the peptide indicate that the chemical behavior of Tl<sup>+</sup> does not necessarily replicate that of K<sup>+</sup>, highlighting the need for caution in utilizing elemental substitution of K<sup>+</sup> by Tl<sup>+</sup> in spectroscopic and crystallographic analyses.

The Journal of Physical Chemistry LettersVol. 16(33)
Tokyo Institute of Technology (JP), University of Illinois Urbana-Champaign (US), Tokyo University of Science (JP), Innovative Research (United States) (US), Institute of Science Tokyo (JP), Chuo University (JP)
Japan Society for the Promotion of Science
Openalex Percentile: Top 15%
Ion channel regulation and function
1.61
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.