Advancing infection profiling under data uncertainty through contagion potential

During the COVID-19 pandemic, the prevalence of asymptomatic cases challenged the reliability of epidemiological statistics in policymaking. To address this, we introduced contagion potential (CP) as a continuous metric derived from sociodemographic and epidemiological data to quantify the infection risk posed by the asymptomatic within a region. However, CP estimation is hindered by incomplete or biased incidence data, where underreporting and testing constraints make direct estimation infeasible. To overcome this limitation, we employ a hypothesis-testing approach to infer CP from sampled data, allowing for robust estimation despite missing information. Even within the sample collected from spatial contact data, individuals possess partial knowledge of their neighborhoods, as their awareness is restricted to interactions captured by available tracking data. We introduce an adjustment factor that calibrates the sample CPs so that the sample is a reasonable estimate of the population CP. Further complicating estimation, biases in epidemiological and mobility data arise from heterogeneous reporting rates and sampling inconsistencies, which we address through inverse probability weighting to enhance reliability. Using a spatial model for infection spread through social mixing and an optimization framework based on the SIRS epidemic model, we analyze real infection datasets from Italy, Germany, and Austria. Our findings demonstrate that statistical methods can achieve high-confidence CP estimates while accounting for variations in sample size, confidence level, mobility models, and viral strains. By assessing the effects of bias, social mixing, and sampling frequency, we propose statistical corrections to improve CP prediction accuracy. Finally, we discuss how reliable CP estimates can inform outbreak mitigation strategies despite the inherent uncertainties in epidemiological data.

Authors

Institutions

Publication Details

Journal
PLoS ONE
Published
2025-08-12
DOI
https://doi.org/10.1371/journal.pone.0329828
Primary Topic
COVID-19 epidemiological studies
Type
article
Field-Weighted Citation Impact
0.00

Funders

Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Advancing infection profiling under data uncertainty through contagion potential

Satyaki Roy, Preetom Biswas, Preetam Ghosh
PLoS ONE
COVID-19 epidemiological studies
article

Advancing infection profiling under data uncertainty through contagion potential

Satyaki Roy, Preetom Biswas, Preetam Ghosh
article en

Abstract

During the COVID-19 pandemic, the prevalence of asymptomatic cases challenged the reliability of epidemiological statistics in policymaking. To address this, we introduced contagion potential (CP) as a continuous metric derived from sociodemographic and epidemiological data to quantify the infection risk posed by the asymptomatic within a region. However, CP estimation is hindered by incomplete or biased incidence data, where underreporting and testing constraints make direct estimation infeasible. To overcome this limitation, we employ a hypothesis-testing approach to infer CP from sampled data, allowing for robust estimation despite missing information. Even within the sample collected from spatial contact data, individuals possess partial knowledge of their neighborhoods, as their awareness is restricted to interactions captured by available tracking data. We introduce an adjustment factor that calibrates the sample CPs so that the sample is a reasonable estimate of the population CP. Further complicating estimation, biases in epidemiological and mobility data arise from heterogeneous reporting rates and sampling inconsistencies, which we address through inverse probability weighting to enhance reliability. Using a spatial model for infection spread through social mixing and an optimization framework based on the SIRS epidemic model, we analyze real infection datasets from Italy, Germany, and Austria. Our findings demonstrate that statistical methods can achieve high-confidence CP estimates while accounting for variations in sample size, confidence level, mobility models, and viral strains. By assessing the effects of bias, social mixing, and sampling frequency, we propose statistical corrections to improve CP prediction accuracy. Finally, we discuss how reliable CP estimates can inform outbreak mitigation strategies despite the inherent uncertainties in epidemiological data.

PLoS ONEVol. 20(8)
Virginia Commonwealth University (US), Arizona State University (US), University of Alabama in Huntsville (US)
National Science Foundation
Good health and well-being
Openalex Percentile: Top 76%
COVID-19 epidemiological studies
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.