The −10 region adjacent to open reading frames is a common expression pattern in <i>Deinococcus-Thermus</i>
Gene transcription and translation are fundamental processes that underpin the vitality of living organisms. In bacteria, the classic promoter elements for transcription include the -35 region and the -10 region, whereas the ribosome binding site (RBS) is essential for translation. Our investigation of the upstream sequences of ORFs in <i>Deinococcus radiodurans</i> has confirmed a -10 region-like motif, which appears as 5'-TANNNT-3' (-10-motif). Through rigorous experimental validation, we have established that this -10-motif functions as the classical -10 region of the promoter during transcription, responsible for initiating transcription of leaderless genes (mRNA products that do not have or only have a very short 5'-UTR), and exhibits specific spacing requirements relative to the ORF. Moreover, our findings suggest that sequences containing -10-motif can serve as promoters for <i>D. radiodurans</i> and introduction of the -35 region at appropriate positions can significantly enhance transcription levels. Genomic analysis revealed that the -10-motif located a few base pairs (bp) upstream of ORFs is common within the <i>Deinococcus-Thermus</i> (<i>D-T</i>) phylum (also known as <i>Deinococcota</i>) and responsible for the transcriptional initiation of leaderless genes. Given these insights, we propose that the -10 region adjacent to the ORF for gene expression via leaderless mRNA constitutes an important mode of expression in the <i>D-T</i> phylum, which may contribute to the extraordinary environmental adaptability observed in this group of microorganisms.
Authors
- Liangyan Wang (ORCID: https://orcid.org/0000-0002-8947-8945)
- Yuejin Hua (ORCID: https://orcid.org/0000-0001-6743-0919)
- Huizhi Lu (ORCID: https://orcid.org/0000-0002-2408-4427)
- Shitong Zhong
- Shuang Song (ORCID: https://orcid.org/0000-0003-4075-2226)
- Linjia Wang
Institutions
- Zhejiang Cancer Hospital (CN)
- Zhejiang University (CN)
Publication Details
- Journal
- Life Science Alliance
- Published
- 2025-08-11
- DOI
- https://doi.org/10.26508/lsa.202503354
- Primary Topic
- RNA and protein synthesis mechanisms
- Type
- article
- Field-Weighted Citation Impact
- 0.00
Funders
- National Natural Science Foundation of China
- Natural Science Foundation of Zhejiang Province