Molecule Graph Networks with Many-Body Equivariant Interactions

Message passing neural networks have demonstrated significant efficacy in predicting molecular interactions. Introducing equivariant vectorial representations augments expressivity by capturing geometric data symmetries, thereby improving model accuracy. However, two-body bond vectors in opposition may cancel each other out during message passing, leading to the loss of directional information on their shared node. In this study, we develop <b>E</b>quivariant <b>N</b>-body <b>I</b>nteraction <b>Net</b>works (ENINet) that explicitly integrates <i>l</i> = 1 equivariant many-body interactions to enhance directional symmetric information in the message passing scheme. We provided a mathematical analysis demonstrating the necessity of incorporating many-body equivariant interactions and generalized the formulation to <i>N</i>-body interactions. Experiments indicate that integrating many-body equivariant representations enhances prediction accuracy across diverse scalar and tensorial quantum chemical properties.

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Publication Details

Journal
Journal of Chemical Theory and Computation
Published
2025-08-09
DOI
https://doi.org/10.1021/acs.jctc.5c00466
Citations
4
Primary Topic
Machine Learning in Materials Science
Type
article
Field-Weighted Citation Impact
2.07

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article

Molecule Graph Networks with Many-Body Equivariant Interactions

Jiawen Li, Chuan-Shen Hu, Koji Tsuda, Kelin Xia et al.
4 citations
Journal of Chemical Theory and Computation
Machine Learning in Materials Science
2.07
article

Molecule Graph Networks with Many-Body Equivariant Interactions

Jiawen Li, Chuan-Shen Hu, Koji Tsuda, Kelin Xia, Masato Sumita, Chen Liang, Zetian Mao, Diptesh Das
article en
4 citations

Abstract

Message passing neural networks have demonstrated significant efficacy in predicting molecular interactions. Introducing equivariant vectorial representations augments expressivity by capturing geometric data symmetries, thereby improving model accuracy. However, two-body bond vectors in opposition may cancel each other out during message passing, leading to the loss of directional information on their shared node. In this study, we develop <b>E</b>quivariant <b>N</b>-body <b>I</b>nteraction <b>Net</b>works (ENINet) that explicitly integrates <i>l</i> = 1 equivariant many-body interactions to enhance directional symmetric information in the message passing scheme. We provided a mathematical analysis demonstrating the necessity of incorporating many-body equivariant interactions and generalized the formulation to <i>N</i>-body interactions. Experiments indicate that integrating many-body equivariant representations enhances prediction accuracy across diverse scalar and tensorial quantum chemical properties.

Journal of Chemical Theory and ComputationVol. 21(16)
Nanyang Technological University (SG), National Institute for Materials Science (JP), RIKEN Center for Advanced Intelligence Project (JP), The University of Tokyo (JP)
Ministry of Education - Singapore, Ministry of Education, Culture, Sports, Science and Technology, Core Research for Evolutional Science and Technology, Exploratory Research for Advanced Technology
Openalex Percentile: Top 12%
Machine Learning in Materials Science
2.07
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Molecule Graph Networks with Many-Body Equivariant Interactions — Jiawen Li, Chuan-Shen Hu, et al. · Journal of Chemical Theory and Computation (2025) | TGRS Research Map | TGRS