Knoellia altitudinis sp. nov., Knoellia pratensis sp. nov., Knoellia terrae sp. nov. and Knoellia tibetensis sp. nov., four novel UV radiation-resistant actinobacteria isolated from Tibet Autonomous Region, China

Four Gram-stain-positive, aerobic, non-motile and non-spore-forming actinobacterial strains (CPCC 206391<sup>T</sup>, CPCC 206453<sup>T</sup>, CPCC 206435<sup>T</sup> and CPCC 206450<sup>T</sup>) were isolated from soil samples collected from Tibet Autonomous Region, China. The 16S rRNA gene sequences of these four strains showed close relations to members of the genus <i>Knoellia</i> of the family <i>Intrasporangiaceae</i>, with similarities of 96.1-99.4% to the validly named species of <i>Knoellia</i>. In the phylogenetic trees based on 16S rRNA gene sequences and the core genome, these isolates clustered into the genus <i>Knoellia</i> clade within the lineage of the family <i>Intrasporangiaceae</i>. Genome relatedness index values between these strains and their phylogenetic neighbours, including average nucleotide identity (78.1-91.5%) and digital DNA-DNA hybridization (19.8-41.0%), were all below the species delineation thresholds. These genomic data, combined with their phenotypic characteristics, supported their classification within the genus <i>Knoellia</i>, representing four novel species. Thereby, <i>Knoellia altitudinis</i> sp. nov. (type strain CPCC 206391<sup>T</sup>=XZ253<sup>T</sup>=KCTC 59139<sup>T</sup>), <i>Knoellia pratensis</i> sp. nov. (type strain CPCC 206453<sup>T</sup>=CXZ644<sup>T</sup>=KCTC 59274<sup>T</sup>), <i>Knoellia terrae</i> sp. nov. (type strain CPCC 206435<sup>T</sup>=CXZ904<sup>T</sup>=KCTC 59271<sup>T</sup>) and <i>Knoellia tibetensis</i> sp. nov. (type strain CPCC 206450<sup>T</sup>=XZ100<sup>T</sup>=KCTC 59273<sup>T</sup>) were proposed. These strains exhibited stable growth under high-intensity UV radiation, attributed to the presence of <i>uvrABC</i> and <i>recAFNOQR</i> genes involved in UV resistance and DNA repair. These features indicate the <i>Knoellia</i> spp<i>.</i> adaptation to high UV radiation environments.

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INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
Published
2025-08-08
DOI
https://doi.org/10.1099/ijsem.0.006855
Citations
1
Primary Topic
Genomics and Phylogenetic Studies
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article
Field-Weighted Citation Impact
0.81

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article

Knoellia altitudinis sp. nov., Knoellia pratensis sp. nov., Knoellia terrae sp. nov. and Knoellia tibetensis sp. nov., four novel UV radiation-resistant actinobacteria isolated from Tibet Autonomous Region, China

Hua-Hong Chen, Liyan Yu, Jinglin Bai, Tong Mou et al.
1 citations
INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY
Genomics and Phylogenetic Studies
0.81
article

Knoellia altitudinis sp. nov., Knoellia pratensis sp. nov., Knoellia terrae sp. nov. and Knoellia tibetensis sp. nov., four novel UV radiation-resistant actinobacteria isolated from Tibet Autonomous Region, China

Hua-Hong Chen, Liyan Yu, Jinglin Bai, Tong Mou, Cong-Jian Li, Jing Zhang, Yu‐Qin Zhang
article en
1 citations

Abstract

Four Gram-stain-positive, aerobic, non-motile and non-spore-forming actinobacterial strains (CPCC 206391<sup>T</sup>, CPCC 206453<sup>T</sup>, CPCC 206435<sup>T</sup> and CPCC 206450<sup>T</sup>) were isolated from soil samples collected from Tibet Autonomous Region, China. The 16S rRNA gene sequences of these four strains showed close relations to members of the genus <i>Knoellia</i> of the family <i>Intrasporangiaceae</i>, with similarities of 96.1-99.4% to the validly named species of <i>Knoellia</i>. In the phylogenetic trees based on 16S rRNA gene sequences and the core genome, these isolates clustered into the genus <i>Knoellia</i> clade within the lineage of the family <i>Intrasporangiaceae</i>. Genome relatedness index values between these strains and their phylogenetic neighbours, including average nucleotide identity (78.1-91.5%) and digital DNA-DNA hybridization (19.8-41.0%), were all below the species delineation thresholds. These genomic data, combined with their phenotypic characteristics, supported their classification within the genus <i>Knoellia</i>, representing four novel species. Thereby, <i>Knoellia altitudinis</i> sp. nov. (type strain CPCC 206391<sup>T</sup>=XZ253<sup>T</sup>=KCTC 59139<sup>T</sup>), <i>Knoellia pratensis</i> sp. nov. (type strain CPCC 206453<sup>T</sup>=CXZ644<sup>T</sup>=KCTC 59274<sup>T</sup>), <i>Knoellia terrae</i> sp. nov. (type strain CPCC 206435<sup>T</sup>=CXZ904<sup>T</sup>=KCTC 59271<sup>T</sup>) and <i>Knoellia tibetensis</i> sp. nov. (type strain CPCC 206450<sup>T</sup>=XZ100<sup>T</sup>=KCTC 59273<sup>T</sup>) were proposed. These strains exhibited stable growth under high-intensity UV radiation, attributed to the presence of <i>uvrABC</i> and <i>recAFNOQR</i> genes involved in UV resistance and DNA repair. These features indicate the <i>Knoellia</i> spp<i>.</i> adaptation to high UV radiation environments.

INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGYVol. 75(8)
Chinese Academy of Medical Sciences & Peking Union Medical College (CN), Chuxiong Normal University (CN)
Innovative Research Group Project of the National Natural Science Foundation of China, National Infrastructure for Microbiological Resources
Life in Land
Openalex Percentile: Top 25%
Genomics and Phylogenetic Studies
0.81
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