Octascope: A Lightweight Pre-Trained Model for Optical Coherence Tomography

Optical coherence tomography (OCT) imaging enables high resolution visualization of sub-surface tissue microstructures. However, OCT image analysis using deep learning is hampered by limited diverse training data to meet performance requirements and high inference latency for real-time applications. To address these challenges, we developed Octascope, a lightweight domain-specific convolutional neural network (CNN) - based model designed for OCT image analysis. Octascope was pre-trained using a curriculum learning approach, which involves sequential training, first on natural images (ImageNet), then on OCT images from retinal, abdominal, and renal tissues, to progressively acquire transferable knowledge. This multi-domain pre-training enables Octascope to generalize across varied tissue types. In two downstream tasks, Octascope demonstrated notable improvements in predictive accuracy compared to alternative approaches. In the epidural tissue detection task, our method surpassed single-task learning with fine-tuning by 9.13% and OCT-specific transfer learning by 5.95% in accuracy. Octascope outperformed VGG16 and ResNet50 by 5.36% and 6.66% in a retinal diagnosis task, respectively. In comparison to a Transformer-based OCT foundation model - RETFound, Octascope delivered 2 to 4.4 times faster inference speed with slightly better predictive accuracies in both downstream tasks. Octascope represented a significant advancement for OCT image analysis by providing an effective balance between computational efficiency and diagnostic accuracy for real-time clinical applications.

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Publication Details

Journal
IEEE Access
Published
2025-01-01
DOI
https://doi.org/10.1109/access.2025.3595838
Primary Topic
Retinal Imaging and Analysis
Type
article
Field-Weighted Citation Impact
0.00

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article

Octascope: A Lightweight Pre-Trained Model for Optical Coherence Tomography

Haoyang Cui, Chongle Pan, Kar‐Ming Fung, Justin Reynolds et al.
IEEE Access
Retinal Imaging and Analysis
article

Octascope: A Lightweight Pre-Trained Model for Optical Coherence Tomography

Haoyang Cui, Chongle Pan, Kar‐Ming Fung, Justin Reynolds, Junyuan Liu, Paul P. Calle, Feng Yan, Qinggong Tang, Yunlong Liu, Chen Wang, Ke Zhang, Zhongxin Yu, Ajay Jain, S. Ly, Ronghao Liu, Qing‐Hao Zhang
article en

Abstract

Optical coherence tomography (OCT) imaging enables high resolution visualization of sub-surface tissue microstructures. However, OCT image analysis using deep learning is hampered by limited diverse training data to meet performance requirements and high inference latency for real-time applications. To address these challenges, we developed Octascope, a lightweight domain-specific convolutional neural network (CNN) - based model designed for OCT image analysis. Octascope was pre-trained using a curriculum learning approach, which involves sequential training, first on natural images (ImageNet), then on OCT images from retinal, abdominal, and renal tissues, to progressively acquire transferable knowledge. This multi-domain pre-training enables Octascope to generalize across varied tissue types. In two downstream tasks, Octascope demonstrated notable improvements in predictive accuracy compared to alternative approaches. In the epidural tissue detection task, our method surpassed single-task learning with fine-tuning by 9.13% and OCT-specific transfer learning by 5.95% in accuracy. Octascope outperformed VGG16 and ResNet50 by 5.36% and 6.66% in a retinal diagnosis task, respectively. In comparison to a Transformer-based OCT foundation model - RETFound, Octascope delivered 2 to 4.4 times faster inference speed with slightly better predictive accuracies in both downstream tasks. Octascope represented a significant advancement for OCT image analysis by providing an effective balance between computational efficiency and diagnostic accuracy for real-time clinical applications.

IEEE AccessVol. 13
University of Oklahoma Health Sciences Center (US), University of Oklahoma (US)
National Science Foundation, Prevent Cancer Foundation, University of Oklahoma, Department of Physiology and Biophysics, University at Buffalo, Oklahoma Center for the Advancement of Science and Technology, China University of Mining and Technology, National Institutes of Health, University of Oklahoma Health Sciences Center, University at Buffalo, National Cancer Institute, National Institute of General Medical Sciences
Openalex Percentile: Top 72%
Retinal Imaging and Analysis
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