GenomicLayers: sequence-based simulation of epi-genomes
GenomicLayers enables scientists working on diverse eukaryotic organisms to test models of gene regulation in silico. Applications include epigenetic silencing, activation by combinatorial binding of transcription factors and the sink effects caused by down-regulation of components of epigenetic regulators. The software is intended to be used to parameterise, refine and combine models and thereby capitalise on data from the thousands of studies of Eukaryotic epigenomes.
Authors
- Dave T. Gerrard (ORCID: https://orcid.org/0000-0001-6890-7213)
Institutions
- University of Manchester (GB)
Publication Details
- Journal
- BMC Bioinformatics
- Published
- 2025-08-04
- DOI
- https://doi.org/10.1186/s12859-025-06224-y
- Primary Topic
- Genomics and Chromatin Dynamics
- Type
- article
- Field-Weighted Citation Impact
- 0.00
Funders
- University of Manchester