Directed Evolution of Class I Aldolases for Cooperative Photobiocatalytic Enantioselective Radical α-Alkylation of Aldehydes

By harnessing the synergy between enzymes and photoredox catalysts, cooperative photobiocatalysis has recently emerged as a promising strategy for developing stereoselective radical reactions. While various cofactor-dependent enzymes have been repurposed, the use of cofactor-independent enzymes in such cooperative catalysis without requiring expensive cofactors remains rare. Herein, we report the successful repurposing of class I aldolases, a prominent family of naturally occurring, cofactor-independent enzymes, to catalyze unnatural radical α-alkylation of aldehydes in a highly enantioselective fashion. Through directed evolution of <i>Escherichia coli</i> 2-deoxy-d-ribose-5-phosphate aldolase (<i>Ec</i>DERA), we developed an effective radical alkylase bearing five mutations and inverted π-facial selectivity relative to wild-type <i>Ec</i>DERA, allowing a range of aldehydes to couple with α-iodoesters, α-iodoketones, and α-iodonitriles with excellent enantiocontrol. This study represents the first demonstration of leveraging the nucleophilic enamine intermediate in class I aldolases for radical-mediated stereoselective C-C bond formation. Mechanistic investigations suggested that when irradiated at 440 nm, cooperative catalysis with an exogenous Ir photocatalyst more effectively induces enzymatic enamine radical activity than charge-transfer complex photochemistry. Together, these findings underscore the potential of class I aldolases to enable general and stereoselective new-to-nature radical transformations.

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Publication Details

Journal
Journal of the American Chemical Society
Published
2025-08-04
DOI
https://doi.org/10.1021/jacs.5c08477
Citations
6
Primary Topic
Radical Photochemical Reactions
Type
article
Field-Weighted Citation Impact
5.62

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article

Directed Evolution of Class I Aldolases for Cooperative Photobiocatalytic Enantioselective Radical α-Alkylation of Aldehydes

Zhiyu Bo, Quanquan Wang, Yang Yang, Michael S. Bratslavsky
6 citations
Journal of the American Chemical Society
Radical Photochemical Reactions
5.62
article

Directed Evolution of Class I Aldolases for Cooperative Photobiocatalytic Enantioselective Radical α-Alkylation of Aldehydes

Zhiyu Bo, Quanquan Wang, Yang Yang, Michael S. Bratslavsky
article en
6 citations

Abstract

By harnessing the synergy between enzymes and photoredox catalysts, cooperative photobiocatalysis has recently emerged as a promising strategy for developing stereoselective radical reactions. While various cofactor-dependent enzymes have been repurposed, the use of cofactor-independent enzymes in such cooperative catalysis without requiring expensive cofactors remains rare. Herein, we report the successful repurposing of class I aldolases, a prominent family of naturally occurring, cofactor-independent enzymes, to catalyze unnatural radical α-alkylation of aldehydes in a highly enantioselective fashion. Through directed evolution of <i>Escherichia coli</i> 2-deoxy-d-ribose-5-phosphate aldolase (<i>Ec</i>DERA), we developed an effective radical alkylase bearing five mutations and inverted π-facial selectivity relative to wild-type <i>Ec</i>DERA, allowing a range of aldehydes to couple with α-iodoesters, α-iodoketones, and α-iodonitriles with excellent enantiocontrol. This study represents the first demonstration of leveraging the nucleophilic enamine intermediate in class I aldolases for radical-mediated stereoselective C-C bond formation. Mechanistic investigations suggested that when irradiated at 440 nm, cooperative catalysis with an exogenous Ir photocatalyst more effectively induces enzymatic enamine radical activity than charge-transfer complex photochemistry. Together, these findings underscore the potential of class I aldolases to enable general and stereoselective new-to-nature radical transformations.

Journal of the American Chemical SocietyVol. 147(32)
University of California, Santa Barbara (US)
David and Lucile Packard Foundation, Alfred P. Sloan Foundation, Camille and Henry Dreyfus Foundation, Army Research Office
Zero hunger
Openalex Percentile: Top 4%
Radical Photochemical Reactions
5.62
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Directed Evolution of Class I Aldolases for Cooperative Photobiocatalytic Enantioselective Radical α-Alkylation of Aldehydes — Zhiyu Bo, Quanquan Wang, et al. · Journal of the American Chemical Society (2025) | TGRS Research Map | TGRS