Crystal structure of Enterovirus A71 2A protease mutant C110A containing VP1-2A junction in the active site apo structure (C1 PDB: 9FGO) used for fragment screen and compound soaking v1

This protocol describes the crystallization of Enterovirus 71 (EV-71) 2A protease mutant C110A containing the VP1-2A junction in the active site. The crystals form within 12-24 hours using a crystallization screen composed of 1.8M NaCl and 15% ethanol. The crystal structure was determined using X-ray diffraction, resulting in hexagonal prism crystals in space group P61 with unit cell dimensions of 61.5Å, 61.5Å, 78.9Å (90.00°, 90.00°, 120.00°) and an average resolution of 1.5Å. The protein was expressed using the plasmid Enterovirus Coxsackievirus A71 2A protease 228633.

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Published
2025-03-04
DOI
https://doi.org/10.17504/protocols.io.6qpvr9b52vmk/v1
Primary Topic
Viral Infections and Immunology Research
Type
article
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article

Crystal structure of Enterovirus A71 2A protease mutant C110A containing VP1-2A junction in the active site apo structure (C1 PDB: 9FGO) used for fragment screen and compound soaking v1

Xiaomin Ni, L. Koekemoer, D. Fearon, Peter Marples
1 links
Viral Infections and Immunology Research
article

Crystal structure of Enterovirus A71 2A protease mutant C110A containing VP1-2A junction in the active site apo structure (C1 PDB: 9FGO) used for fragment screen and compound soaking v1

Xiaomin Ni, L. Koekemoer, D. Fearon, Peter Marples
article en

Abstract

This protocol describes the crystallization of Enterovirus 71 (EV-71) 2A protease mutant C110A containing the VP1-2A junction in the active site. The crystals form within 12-24 hours using a crystallization screen composed of 1.8M NaCl and 15% ethanol. The crystal structure was determined using X-ray diffraction, resulting in hexagonal prism crystals in space group P61 with unit cell dimensions of 61.5Å, 61.5Å, 78.9Å (90.00°, 90.00°, 120.00°) and an average resolution of 1.5Å. The protein was expressed using the plasmid Enterovirus Coxsackievirus A71 2A protease 228633.

Diamond Light Source (GB)
Diamond Light Source, National Institutes of Health, National Institute of Allergy and Infectious Diseases
Openalex Percentile: Top 69%
Viral Infections and Immunology Research
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