Vibrational energy flow in adenosine triphosphate

Intermolecular vibrational energy transfer from H2O to adenosine triphosphate (ATP) molecules and intramolecular energy redistribution in ATP have been studied using the semiclassical Wentzel-Kramers-Brillouin procedure and quasiclassical trajectory calculations. The hydrogen bond interaction between the excited vibrational stretches of H2O (symmetric stretching mode in v = 1) and OH vibration of the γ-phosphate of the ground state ATP leads to efficient intermolecular energy flow, which is followed by intramolecular energy distribution in ATP. The phosphorus-oxygen chain functions as an efficient pathway for energy distribution to the ribose moiety and then ultimately to the terminal stretches of the adenine moiety, distributing most of the available energy to high-frequency OH, CH, and NH bonds on a sub-picosecond scale, while the hydrogen bond maintains its lifetime of ∼2 ps.

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Publication Details

Journal
The Journal of Chemical Physics
Published
2025-08-04
DOI
https://doi.org/10.1063/5.0279604
Primary Topic
Spectroscopy and Quantum Chemical Studies
Type
article
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article

Vibrational energy flow in adenosine triphosphate

Hyung Kyu Shin
The Journal of Chemical Physics
Spectroscopy and Quantum Chemical Studies
article

Vibrational energy flow in adenosine triphosphate

Hyung Kyu Shin
article en

Abstract

Intermolecular vibrational energy transfer from H2O to adenosine triphosphate (ATP) molecules and intramolecular energy redistribution in ATP have been studied using the semiclassical Wentzel-Kramers-Brillouin procedure and quasiclassical trajectory calculations. The hydrogen bond interaction between the excited vibrational stretches of H2O (symmetric stretching mode in v = 1) and OH vibration of the γ-phosphate of the ground state ATP leads to efficient intermolecular energy flow, which is followed by intramolecular energy distribution in ATP. The phosphorus-oxygen chain functions as an efficient pathway for energy distribution to the ribose moiety and then ultimately to the terminal stretches of the adenine moiety, distributing most of the available energy to high-frequency OH, CH, and NH bonds on a sub-picosecond scale, while the hydrogen bond maintains its lifetime of ∼2 ps.

The Journal of Chemical PhysicsVol. 163(5)
University of Nevada, Reno (US)
Affordable and clean energy
Openalex Percentile: Top 86%
Spectroscopy and Quantum Chemical Studies
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