MetninOzU at BioLaySumm2025: Text Summarization with Reverse Data Augmentation and Injecting Salient Sentences

In this paper, we present our approach to the BioLaySumm 2025 Shared Task on lay summarization of biomedical research articles, which was conducted as part of the BioNLP Workshop 2025.This marks the third edition of the BioLaySumm Shared Task (Goldsack et al., 2023(Goldsack et al., , 2024;;Xiao et al., 2025).The aim of the task is to create lay summaries from scientific articles to improve accessibility for a nonexpert audience.To this end, we applied preprocessing techniques to clean and standardize the input texts, and fine-tuned Qwen2.5 (Team, 2024; Team) and Qwen3-based language models (Yang et al., 2025;Team, 2025) for the summarization task.For abstract-based finetuning, we investigated whether we can insert salient sentences from the main article into the summary to enrich the input.We also curated a dataset of child-friendly articles with corresponding gold-standard summaries and used large language models to rewrite them into more complex scientific variants to augment our training data with more examples.

Authors

Publication Details

Published
2025-01-01
DOI
https://doi.org/10.18653/v1/2025.bionlp-share.22
Primary Topic
Biomedical Text Mining and Ontologies
Type
article
Field-Weighted Citation Impact
0.00
Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

MetninOzU at BioLaySumm2025: Text Summarization with Reverse Data Augmentation and Injecting Salient Sentences

Olcay Taner Yıldız, E. Evgin, İlknur Karadenız
Biomedical Text Mining and Ontologies
article

MetninOzU at BioLaySumm2025: Text Summarization with Reverse Data Augmentation and Injecting Salient Sentences

Olcay Taner Yıldız, E. Evgin, İlknur Karadenız
article en

Abstract

In this paper, we present our approach to the BioLaySumm 2025 Shared Task on lay summarization of biomedical research articles, which was conducted as part of the BioNLP Workshop 2025.This marks the third edition of the BioLaySumm Shared Task (Goldsack et al., 2023(Goldsack et al., , 2024;;Xiao et al., 2025).The aim of the task is to create lay summaries from scientific articles to improve accessibility for a nonexpert audience.To this end, we applied preprocessing techniques to clean and standardize the input texts, and fine-tuned Qwen2.5 (Team, 2024; Team) and Qwen3-based language models (Yang et al., 2025;Team, 2025) for the summarization task.For abstract-based finetuning, we investigated whether we can insert salient sentences from the main article into the summary to enrich the input.We also curated a dataset of child-friendly articles with corresponding gold-standard summaries and used large language models to rewrite them into more complex scientific variants to augment our training data with more examples.

Openalex Percentile: Top 83%
Biomedical Text Mining and Ontologies
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.