Team XSZ at BioLaySumm2025: Section-Wise Summarization, Retrieval-Augmented LLM, and Reinforcement Learning Fine-Tuning for Lay Summaries

We present a multi-stage pipeline for BioLay-Summ 2025 Subtask 1.1 that improves readability, relevance, and factuality.First, we select the top-5 relevant sections and generate summaries with BioBART.Next, we retrieve a Kshot demonstration using BGE embeddings to prompt Llama 3 8B and fine-tune it with LoRA.We then merge section summaries via a second BioBART pass.Finally, we apply reinforcement learning (PPO and GRPO) with a composite reward combining factuality (AlignScore, SummaC), relevance (ROUGE-L, BERTScore), and readability (LENS, FKGL, DCRS, CLI).On PLOS and eLife validation sets, our pipeline reduces DCRS from 9.23 to 8.56 and CLI from 12.98 to 12.65, and boosts AlignScore from 0.722 to 0.862, demonstrating balanced gains in lay-summary quality.

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Publication Details

Published
2025-01-01
DOI
https://doi.org/10.18653/v1/2025.bionlp-share.33
Citations
1
Primary Topic
Biomedical Text Mining and Ontologies
Type
article
Field-Weighted Citation Impact
0.81
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article

Team XSZ at BioLaySumm2025: Section-Wise Summarization, Retrieval-Augmented LLM, and Reinforcement Learning Fine-Tuning for Lay Summaries

Pengcheng Xu, Jieli Zhou, Hongyi Xin, Sicheng Shen
1 citations
Biomedical Text Mining and Ontologies
0.81
article

Team XSZ at BioLaySumm2025: Section-Wise Summarization, Retrieval-Augmented LLM, and Reinforcement Learning Fine-Tuning for Lay Summaries

Pengcheng Xu, Jieli Zhou, Hongyi Xin, Sicheng Shen
article en
1 citations

Abstract

We present a multi-stage pipeline for BioLay-Summ 2025 Subtask 1.1 that improves readability, relevance, and factuality.First, we select the top-5 relevant sections and generate summaries with BioBART.Next, we retrieve a Kshot demonstration using BGE embeddings to prompt Llama 3 8B and fine-tune it with LoRA.We then merge section summaries via a second BioBART pass.Finally, we apply reinforcement learning (PPO and GRPO) with a composite reward combining factuality (AlignScore, SummaC), relevance (ROUGE-L, BERTScore), and readability (LENS, FKGL, DCRS, CLI).On PLOS and eLife validation sets, our pipeline reduces DCRS from 9.23 to 8.56 and CLI from 12.98 to 12.65, and boosts AlignScore from 0.722 to 0.862, demonstrating balanced gains in lay-summary quality.

Shanghai Jiao Tong University (CN)
Quality Education
Openalex Percentile: Top 25%
Biomedical Text Mining and Ontologies
0.81
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Team XSZ at BioLaySumm2025: Section-Wise Summarization, Retrieval-Augmented LLM, and Reinforcement Learning Fine-Tuning for Lay Summaries — Pengcheng Xu, Jieli Zhou, et al. · (2025) | TGRS Research Map | TGRS