SUWMIT at BioLaySumm2025: Instruction-based Summarization with Contrastive Decoding

In the following paper, we present our team's approach to subtask 1.1 of the BioLaySumm 2025 shared task, which entails the automated generation of lay summaries from biomedical articles.To this end, we experiment with a variety of methods for text preprocessing, extractive summarization, model fine-tuning, and abstractive summarization.Our final results are generated on a fine-tuned Llama 3.1 Instruct (8B) model, notably achieving top scores on two out of four relevance metrics, as well as the highest overall ranking among this year's participating teams on the plain lay summarization subtask.

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Publication Details

Published
2025-01-01
DOI
https://doi.org/10.18653/v1/2025.bionlp-share.29
Primary Topic
Biomedical Text Mining and Ontologies
Type
article
Field-Weighted Citation Impact
0.00

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SUWMIT at BioLaySumm2025: Instruction-based Summarization with Contrastive Decoding

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Biomedical Text Mining and Ontologies
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SUWMIT at BioLaySumm2025: Instruction-based Summarization with Contrastive Decoding

Yongsin Park, Priyam Basu, Jose Cols, Daniel Jarvis, Daniel Rodabaugh
article en

Abstract

In the following paper, we present our team's approach to subtask 1.1 of the BioLaySumm 2025 shared task, which entails the automated generation of lay summaries from biomedical articles.To this end, we experiment with a variety of methods for text preprocessing, extractive summarization, model fine-tuning, and abstractive summarization.Our final results are generated on a fine-tuned Llama 3.1 Instruct (8B) model, notably achieving top scores on two out of four relevance metrics, as well as the highest overall ranking among this year's participating teams on the plain lay summarization subtask.

Center for Applied Linguistics (US)
University of Washington
Openalex Percentile: Top 83%
Biomedical Text Mining and Ontologies
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