MIRAGES at BioLaySumm2025: The Impact of Search Terms and Data Curation for Biomedical Lay Summarization

Biomedical articles are often inaccessible to non-experts due to their technical complexity.To improve readability and factuality of lay summaries, we built on an extract-thensummarize framework by experimenting with novel extractive summarization strategies and employing Low Rank Adaptation (LoRA) finetuning of Meta-Llama-3-8B-Instruct on data selected by these strategies.We also explored counterfactual data augmentation and postprocessing definition insertion to further enhance factual grounding and accessibility.Our best performing system treats the article's title and keywords (i.e.search terms) as a single semantic centroid and ranks sentences by their semantic similarity to this centroid.This constrained selection of data serves as input for fine-tuning, achieving marked improvements in readability and factuality of downstream abstractive summaries while maintaining relevance.Our approach highlights the importance of quality data curation for biomedical lay summarization, resulting in 4th best overall performance and 2nd best Readability performance for the BioLaySumm 2025 Shared Task at BioNLP 2025.

Authors

Institutions

Publication Details

Published
2025-01-01
DOI
https://doi.org/10.18653/v1/2025.bionlp-share.28
Primary Topic
Biomedical Text Mining and Ontologies
Type
article
Field-Weighted Citation Impact
0.00
Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

MIRAGES at BioLaySumm2025: The Impact of Search Terms and Data Curation for Biomedical Lay Summarization

Amalia Jiménez, Jonathan H. Jiang, Jianzhong Chen, Benjamin Pong et al.
Biomedical Text Mining and Ontologies
article

MIRAGES at BioLaySumm2025: The Impact of Search Terms and Data Curation for Biomedical Lay Summarization

Amalia Jiménez, Jonathan H. Jiang, Jianzhong Chen, Benjamin Pong, Melody Vahadi
article en

Abstract

Biomedical articles are often inaccessible to non-experts due to their technical complexity.To improve readability and factuality of lay summaries, we built on an extract-thensummarize framework by experimenting with novel extractive summarization strategies and employing Low Rank Adaptation (LoRA) finetuning of Meta-Llama-3-8B-Instruct on data selected by these strategies.We also explored counterfactual data augmentation and postprocessing definition insertion to further enhance factual grounding and accessibility.Our best performing system treats the article's title and keywords (i.e.search terms) as a single semantic centroid and ranks sentences by their semantic similarity to this centroid.This constrained selection of data serves as input for fine-tuning, achieving marked improvements in readability and factuality of downstream abstractive summaries while maintaining relevance.Our approach highlights the importance of quality data curation for biomedical lay summarization, resulting in 4th best overall performance and 2nd best Readability performance for the BioLaySumm 2025 Shared Task at BioNLP 2025.

University of Washington (US)
Openalex Percentile: Top 83%
Biomedical Text Mining and Ontologies
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.

MIRAGES at BioLaySumm2025: The Impact of Search Terms and Data Curation for Biomedical Lay Summarization — Amalia Jiménez, Jonathan H. Jiang, et al. · (2025) | TGRS Research Map | TGRS