ZIKV NS2B-NS3 protease dose response screening assay v1

Purpose: performing dose-response test of selected compounds from screening experiments against ZIKV NS2B-NS3 to confirm efficacy General description: This protocol details the fluorescent assays for ZIKV NS2B-NS3 cleavage of substrate Bz-Nle-KRR-AMC peptide. This method measures the fluorescence from the released AMC product as a result of the enzymatic reaction. When hydrolyzed, AMC is liberated from the peptide substrate. Excitation of AMC at 350 nm emits a resonant energy of 450 nm. When the enzyme is inhibited, the fluorescence signal will decrease as a result of lower enzyme activity. The screening method is validated by calculating the Z prime number of each plate, and the percentage of inhibition is calculated and then evaluated for inhibitory efficacy. Outcome: hits were selected from screening assays with more than 50% inhibition and some hits demonstrated dose-response

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Publication Details

Published
2024-11-03
DOI
https://doi.org/10.17504/protocols.io.x54v9r83zv3e/v1
Primary Topic
Virus-based gene therapy research
Type
article
Field-Weighted Citation Impact
0.00

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article

ZIKV NS2B-NS3 protease dose response screening assay v1

Jiyun Zhu, Haim Michael Barr, Noa Lahav
Virus-based gene therapy research
article

ZIKV NS2B-NS3 protease dose response screening assay v1

Jiyun Zhu, Haim Michael Barr, Noa Lahav
article en

Abstract

Purpose: performing dose-response test of selected compounds from screening experiments against ZIKV NS2B-NS3 to confirm efficacy General description: This protocol details the fluorescent assays for ZIKV NS2B-NS3 cleavage of substrate Bz-Nle-KRR-AMC peptide. This method measures the fluorescence from the released AMC product as a result of the enzymatic reaction. When hydrolyzed, AMC is liberated from the peptide substrate. Excitation of AMC at 350 nm emits a resonant energy of 450 nm. When the enzyme is inhibited, the fluorescence signal will decrease as a result of lower enzyme activity. The screening method is validated by calculating the Z prime number of each plate, and the percentage of inhibition is calculated and then evaluated for inhibitory efficacy. Outcome: hits were selected from screening assays with more than 50% inhibition and some hits demonstrated dose-response

Weizmann Institute of Science (IL)
National Institutes of Health, National Institute of Allergy and Infectious Diseases
Openalex Percentile: Top 71%
Virus-based gene therapy research
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