A finitely stable edit distance for merge trees

In this paper, we defined a novel edit distance for merge trees, which we argued to be suitable for a broad range of applications. Relying also on some technical results contained in other works, we investigated its stability properties, which ended up being analogous to the ones of the 1-Wasserstein distance between persistence diagrams. We tested and compared our metric against the interleaving distance in several simulations and case studies, highlighting the trade-off between stability and sensitivity when choosing the appropriate metric for a given data analysis problem, much alike the bias-variance trade-off in statistical modeling. In the appendix, we also compared our metric with other edit distances appearing in the literature, with both theoretic and practical considerations.

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Publication Details

Journal
AIMS Mathematics
Published
2025-01-01
DOI
https://doi.org/10.3934/math.2025769
Primary Topic
Topological and Geometric Data Analysis
Type
article
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article

A finitely stable edit distance for merge trees

M. Pegoraro
AIMS Mathematics
Topological and Geometric Data Analysis
article

A finitely stable edit distance for merge trees

M. Pegoraro
article en

Abstract

In this paper, we defined a novel edit distance for merge trees, which we argued to be suitable for a broad range of applications. Relying also on some technical results contained in other works, we investigated its stability properties, which ended up being analogous to the ones of the 1-Wasserstein distance between persistence diagrams. We tested and compared our metric against the interleaving distance in several simulations and case studies, highlighting the trade-off between stability and sensitivity when choosing the appropriate metric for a given data analysis problem, much alike the bias-variance trade-off in statistical modeling. In the appendix, we also compared our metric with other edit distances appearing in the literature, with both theoretic and practical considerations.

AIMS MathematicsVol. 10(7)
KTH Royal Institute of Technology (SE)
Openalex Percentile: Top 80%
Topological and Geometric Data Analysis
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