Decoding PDI diversity: Insights into structure, domains, and functionality in sorghum

Proteins play indispensable roles in cellular function, acting as both structural components and catalysts for essential biological processes. Their proper folding into three-dimensional structures is critical for functionality. To ensure correct folding, proteins interact with chaperones and folding catalysts such as Protein Disulfide Isomerases (PDIs), which assist in the formation and rearrangement of disulfide bonds that stabilize proteins by linking cysteine residues. PDIs are part of the thioredoxin (TRX) superfamily and are characterized by a conserved CXXC motif that contributes to their redox potential. They exhibit isomerase and oxidoreductase activities, that enable them to rearrange and form new disulfide bonds. PDI family members in sorghum (SbPDI) present a broad and largely unexplored diversity in domain order, structure, and architecture between or even within species. To shed light on this diversity, we identified and characterized PDI family members in sorghum <i>in silico</i> to explore their domain architecture, three-dimensional structure and functionality.

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Journal
Computational and Structural Biotechnology Journal
Published
2025-01-01
DOI
https://doi.org/10.1016/j.csbj.2025.07.035
Primary Topic
Genetic Mapping and Diversity in Plants and Animals
Type
article
Field-Weighted Citation Impact
0.00

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article

Decoding PDI diversity: Insights into structure, domains, and functionality in sorghum

Marc T. Morris, Ian D. Godwin, Gerhard Schenk, Peter A. Crisp et al.
Computational and Structural Biotechnology Journal
Genetic Mapping and Diversity in Plants and Animals
article

Decoding PDI diversity: Insights into structure, domains, and functionality in sorghum

Marc T. Morris, Ian D. Godwin, Gerhard Schenk, Peter A. Crisp, Karen Massel, Millicent R. Smith, Carla F. López-Gómez
article en

Abstract

Proteins play indispensable roles in cellular function, acting as both structural components and catalysts for essential biological processes. Their proper folding into three-dimensional structures is critical for functionality. To ensure correct folding, proteins interact with chaperones and folding catalysts such as Protein Disulfide Isomerases (PDIs), which assist in the formation and rearrangement of disulfide bonds that stabilize proteins by linking cysteine residues. PDIs are part of the thioredoxin (TRX) superfamily and are characterized by a conserved CXXC motif that contributes to their redox potential. They exhibit isomerase and oxidoreductase activities, that enable them to rearrange and form new disulfide bonds. PDI family members in sorghum (SbPDI) present a broad and largely unexplored diversity in domain order, structure, and architecture between or even within species. To shed light on this diversity, we identified and characterized PDI family members in sorghum <i>in silico</i> to explore their domain architecture, three-dimensional structure and functionality.

Computational and Structural Biotechnology JournalVol. 27
The University of Queensland (AU), Agriculture and Food (AU)
Deutsche Forschungsgemeinschaft, University of Queensland
Zero hunger
Openalex Percentile: Top 79%
Genetic Mapping and Diversity in Plants and Animals
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Decoding PDI diversity: Insights into structure, domains, and functionality in sorghum — Marc T. Morris, Ian D. Godwin, et al. · Computational and Structural Biotechnology Journal (2025) | TGRS Research Map | TGRS