Investigation of key ferroptosis-associated genes and potential therapeutic drugs for asthma based on machine learning and regression models
Bronchial asthma is a complex and heterogeneous disease, with ferroptosis, a form of non-apoptotic cell death, contributing to its pathogenesis by inducing airway epithelial damage, inflammatory infiltration, and airway remodeling. Investigating ferroptosis-related characteristic genes and potential therapeutic compounds may enhance asthma management. This study employed differential analysis and machine learning to identify ferroptosis-related characteristic genes in asthma using the GSE179156 dataset and FerrDb V2 database. Immune infiltration analysis explored the associations between these genes and immune cells, while potential small-molecule drugs were screened through the Connectivity Map (CMap) database and evaluated via molecular docking and molecular dynamics simulations. Two ferroptosis-related characteristic genes, AGPS and APELA, were identified, with AGPS upregulated and APELA downregulated in asthma, both significantly correlated with various immune cells. A diagnostic model based on these genes demonstrated high predictive accuracy. Additionally, KU-55933 was identified as a potential small-molecule inhibitor of AGPS, with stable binding confirmed through computational simulations. These findings emphasize the role of ferroptosis-related genes in asthma and propose promising therapeutic candidates, providing novel insights into its diagnosis and treatment.
Authors
- Liqun Wu (ORCID: https://orcid.org/0009-0006-1594-6423)
- Ye Zhang (ORCID: https://orcid.org/0000-0001-6327-1033)
- Yuhang Chen (ORCID: https://orcid.org/0009-0009-1579-5479)
- Ke Zhu (ORCID: https://orcid.org/0000-0003-3178-3493)
- Jiaojiao Hu
- Fangwei Xu (ORCID: https://orcid.org/0000-0002-8274-346X)
- Hong Chen (ORCID: https://orcid.org/0000-0002-0943-2286)
- Jie Wang (ORCID: https://orcid.org/0009-0005-7117-8580)
- Ziwei Zhang (ORCID: https://orcid.org/0000-0002-0246-6619)
Institutions
- Guiyang College of Traditional Chinese Medicine (CN)
- Beijing University of Chinese Medicine (CN)
- Guizhou University (CN)
- Yunnan Provincial Hospital of Traditional Chinese Medicine (CN)
- Shenzhen Maternity and Child Healthcare Hospital (CN)
Publication Details
- Journal
- Scientific Reports
- Published
- 2025-07-26
- DOI
- https://doi.org/10.1038/s41598-025-06122-6
- Citations
- 3
- Primary Topic
- Ferroptosis and cancer prognosis
- Type
- article
- Field-Weighted Citation Impact
- 4.56