Investigation of key ferroptosis-associated genes and potential therapeutic drugs for asthma based on machine learning and regression models

Bronchial asthma is a complex and heterogeneous disease, with ferroptosis, a form of non-apoptotic cell death, contributing to its pathogenesis by inducing airway epithelial damage, inflammatory infiltration, and airway remodeling. Investigating ferroptosis-related characteristic genes and potential therapeutic compounds may enhance asthma management. This study employed differential analysis and machine learning to identify ferroptosis-related characteristic genes in asthma using the GSE179156 dataset and FerrDb V2 database. Immune infiltration analysis explored the associations between these genes and immune cells, while potential small-molecule drugs were screened through the Connectivity Map (CMap) database and evaluated via molecular docking and molecular dynamics simulations. Two ferroptosis-related characteristic genes, AGPS and APELA, were identified, with AGPS upregulated and APELA downregulated in asthma, both significantly correlated with various immune cells. A diagnostic model based on these genes demonstrated high predictive accuracy. Additionally, KU-55933 was identified as a potential small-molecule inhibitor of AGPS, with stable binding confirmed through computational simulations. These findings emphasize the role of ferroptosis-related genes in asthma and propose promising therapeutic candidates, providing novel insights into its diagnosis and treatment.

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Publication Details

Journal
Scientific Reports
Published
2025-07-26
DOI
https://doi.org/10.1038/s41598-025-06122-6
Citations
3
Primary Topic
Ferroptosis and cancer prognosis
Type
article
Field-Weighted Citation Impact
4.56
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article

Investigation of key ferroptosis-associated genes and potential therapeutic drugs for asthma based on machine learning and regression models

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3 citations
Scientific Reports
Ferroptosis and cancer prognosis
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article

Investigation of key ferroptosis-associated genes and potential therapeutic drugs for asthma based on machine learning and regression models

Liqun Wu, Ye Zhang, Yuhang Chen, Ke Zhu, Jiaojiao Hu, Fangwei Xu, Hong Chen, Jie Wang, Ziwei Zhang
article en
3 citations

Abstract

Bronchial asthma is a complex and heterogeneous disease, with ferroptosis, a form of non-apoptotic cell death, contributing to its pathogenesis by inducing airway epithelial damage, inflammatory infiltration, and airway remodeling. Investigating ferroptosis-related characteristic genes and potential therapeutic compounds may enhance asthma management. This study employed differential analysis and machine learning to identify ferroptosis-related characteristic genes in asthma using the GSE179156 dataset and FerrDb V2 database. Immune infiltration analysis explored the associations between these genes and immune cells, while potential small-molecule drugs were screened through the Connectivity Map (CMap) database and evaluated via molecular docking and molecular dynamics simulations. Two ferroptosis-related characteristic genes, AGPS and APELA, were identified, with AGPS upregulated and APELA downregulated in asthma, both significantly correlated with various immune cells. A diagnostic model based on these genes demonstrated high predictive accuracy. Additionally, KU-55933 was identified as a potential small-molecule inhibitor of AGPS, with stable binding confirmed through computational simulations. These findings emphasize the role of ferroptosis-related genes in asthma and propose promising therapeutic candidates, providing novel insights into its diagnosis and treatment.

Scientific ReportsVol. 15(1)
Guiyang College of Traditional Chinese Medicine (CN), Beijing University of Chinese Medicine (CN), Guizhou University (CN), Yunnan Provincial Hospital of Traditional Chinese Medicine (CN), Shenzhen Maternity and Child Healthcare Hospital (CN)
Good health and well-being
Openalex Percentile: Top 5%
Ferroptosis and cancer prognosis
4.56
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