Chromosome-level genome assembly of bivalve mollusk, Xishishe Coelomactra antiquata
Coelomactra antiquata, a significant marine economic shellfish in China, is experiencing a natural population decline due to habitat destruction and overfishing, making the restoration and conservation of its natural resources an urgent priority. This study provides a high - quality chromosome - level genome assembly for C. antiquata, created by PacBio and Hi - C sequencing and resulting in a 19 - chromosome map. The assembly encompasses a genome size of 807.31 Mb, with a contig N50 of 17.35 Mb and a scaffold N50 of 42.90 Mb. A total of 28,070 protein - coding genes were identified, 25,959 of which were functionally annotated. Overall, this study offers a chromosome - level genome for C. antiquata that is highly continuous and complete, providing an indispensable resource for subsequent molecular and genetic studies of this species.
Authors
- Xi Xie (ORCID: https://orcid.org/0000-0003-3588-7329)
- Hualin Li
- Yongxin Sun
- Yongan Bai
- Dacheng Li (ORCID: https://orcid.org/0000-0002-0487-2581)
- Zunchun Zhou (ORCID: https://orcid.org/0000-0003-0716-2363)
- Shuo Wang (ORCID: https://orcid.org/0000-0003-4604-7923)
- Weiming Teng
- Qingzhi Wang (ORCID: https://orcid.org/0000-0001-8622-3966)
- Xiangfeng Liu (ORCID: https://orcid.org/0000-0002-6821-449X)
- Zuoan Yu
Institutions
- Dalian Ocean University (CN)
- Queen Mary University of London (GB)
- Ministry of Agriculture and Rural Affairs (CN)
- Liaoning Ocean and Fisheries Research Institute (CN)
- Pingjin Hospital (CN)
Publication Details
- Journal
- Scientific Data
- Published
- 2025-07-26
- DOI
- https://doi.org/10.1038/s41597-025-05661-x
- Primary Topic
- Aquatic Invertebrate Ecology and Behavior
- Type
- article
- Field-Weighted Citation Impact
- 0.00
Funders
- China Scholarship Council
- Liaoning Academy of Agricultural Sciences
- National Key Research and Development Program of China