Identification of Auxin-Associated Genes in Wheat Through Comparative Transcriptome Analysis and Validation of the Candidate Receptor-like Kinase Gene TaPBL7-2B in Arabidopsis

Auxin (IAA), a key natural signaling molecule, plays a pivotal role in regulating plant growth, development, and stress responses. Understanding its signal transduction mechanisms is crucial for improving crop yields. In this study, we conducted a comparative transcriptome analysis of wheat leaf and root tissues treated with different concentrations of IAA (0, 1, and 50 μM). Functional enrichment analysis revealed that differentially expressed genes (DEGs) exhibited tissue-specific regulatory patterns in response to auxin. Weighted Gene Co-expression Network Analysis (WGCNA) identified receptor-like kinase genes within the MEgreen module as highly correlated with auxin response, suggesting their involvement in both root and leaf regulation. Among them, <i>TaPBL7-2B</i>, a receptor-like kinase gene significantly upregulated under 50 μM IAA treatment, was selected for functional validation. Ectopic overexpression of <i>TaPBL7-2B</i> in <i>Arabidopsis thaliana</i> (Col-0) enhanced auxin sensitivity and inhibited plant growth by suppressing root development and leaf expansion. In contrast, knockout of the Arabidopsis homolog <i>AtPBL7</i> reduced auxin sensitivity and promoted both root and leaf growth. Transcriptome analysis of Col-0, the <i>TaPBL7-2B</i> overexpression line, and the <i>pbl7</i> mutant indicated that <i>TaPBL7-2B</i> primarily functions through the MAPK signaling pathway and plant hormone signal transduction pathway. Furthermore, qRT-PCR analysis of wheat varieties with differing auxin sensitivities confirmed a positive correlation between <i>TaPBL7-2B</i> expression and auxin response. In conclusion, <i>TaPBL7-2B</i> acts as a negative regulator of plant growth, affecting root development and leaf expansion in both Arabidopsis and wheat. These findings enhance our understanding of auxin signaling and provide new insights for optimizing crop architecture and productivity.

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Journal
Plants
Published
2025-07-24
DOI
https://doi.org/10.3390/plants14152277
Primary Topic
Plant Molecular Biology Research
Type
article
Field-Weighted Citation Impact
0.00

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article

Identification of Auxin-Associated Genes in Wheat Through Comparative Transcriptome Analysis and Validation of the Candidate Receptor-like Kinase Gene TaPBL7-2B in Arabidopsis

Linrun Xiang, Guangzhu Chen, Jie Cai, Yongjie Ji et al.
Plants
Plant Molecular Biology Research
article

Identification of Auxin-Associated Genes in Wheat Through Comparative Transcriptome Analysis and Validation of the Candidate Receptor-like Kinase Gene TaPBL7-2B in Arabidopsis

Linrun Xiang, Guangzhu Chen, Jie Cai, Yongjie Ji, Xinhong Chen, Mengjie Zhang, Jun Wang
article en

Abstract

Auxin (IAA), a key natural signaling molecule, plays a pivotal role in regulating plant growth, development, and stress responses. Understanding its signal transduction mechanisms is crucial for improving crop yields. In this study, we conducted a comparative transcriptome analysis of wheat leaf and root tissues treated with different concentrations of IAA (0, 1, and 50 μM). Functional enrichment analysis revealed that differentially expressed genes (DEGs) exhibited tissue-specific regulatory patterns in response to auxin. Weighted Gene Co-expression Network Analysis (WGCNA) identified receptor-like kinase genes within the MEgreen module as highly correlated with auxin response, suggesting their involvement in both root and leaf regulation. Among them, <i>TaPBL7-2B</i>, a receptor-like kinase gene significantly upregulated under 50 μM IAA treatment, was selected for functional validation. Ectopic overexpression of <i>TaPBL7-2B</i> in <i>Arabidopsis thaliana</i> (Col-0) enhanced auxin sensitivity and inhibited plant growth by suppressing root development and leaf expansion. In contrast, knockout of the Arabidopsis homolog <i>AtPBL7</i> reduced auxin sensitivity and promoted both root and leaf growth. Transcriptome analysis of Col-0, the <i>TaPBL7-2B</i> overexpression line, and the <i>pbl7</i> mutant indicated that <i>TaPBL7-2B</i> primarily functions through the MAPK signaling pathway and plant hormone signal transduction pathway. Furthermore, qRT-PCR analysis of wheat varieties with differing auxin sensitivities confirmed a positive correlation between <i>TaPBL7-2B</i> expression and auxin response. In conclusion, <i>TaPBL7-2B</i> acts as a negative regulator of plant growth, affecting root development and leaf expansion in both Arabidopsis and wheat. These findings enhance our understanding of auxin signaling and provide new insights for optimizing crop architecture and productivity.

PlantsVol. 14(15)
North West Agriculture and Forestry University (CN)
National Science and Technology Major Project, National Key Research and Development Program of China
Openalex Percentile: Top 87%
Plant Molecular Biology Research
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