Semi-supervised medical image segmentation based on multi-stage iterative training and high-confidence pseudo-labeling

Due to the scarcity and high cost of pixel-level annotations for training data, semi-supervised learning has gradually become a key solution. Most existing methods rely on consistency regularization and pseudo-label generation, often adopting multi-branch structures to generate pseudo-labels for co-training. Such approaches, however, commonly yield low-confidence pseudo-labels from perturbed inputs, which can degrade model performance. To address these challenges, we propose a novel semi-supervised segmentation framework that leverages a multi-stage training strategy, distinguishing between the training processes for labeled and unlabeled data to enhance pseudo-label reliability. This framework effectively minimizes the negative impact of multi-branch gradient interference during co-training, reducing the adverse effects of input perturbations. Furthermore, we introduce a Balanced Uncertainty Adjustment Module (BUAM) to improve pseudo-label generation, thus maximizing data utilization efficiency. By enhancing model stability and producing more reliable pseudo-labels, the proposed multi-stage approach offers a clear advantage over existing methods. Extensive experiments on the ISIC and Cardiac MRI medical image datasets demonstrate the advantages and effectiveness of our framework, which outperforms the state-of-the-art methods.

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Publication Details

Journal
Biomedical Physics & Engineering Express
Published
2025-07-24
DOI
https://doi.org/10.1088/2057-1976/adf3b7
Primary Topic
Advanced Neural Network Applications
Type
article
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article

Semi-supervised medical image segmentation based on multi-stage iterative training and high-confidence pseudo-labeling

Haojie Tao, Keming Mao, Yechuan Xu, J. Liu
Biomedical Physics & Engineering Express
Advanced Neural Network Applications
article

Semi-supervised medical image segmentation based on multi-stage iterative training and high-confidence pseudo-labeling

Haojie Tao, Keming Mao, Yechuan Xu, J. Liu
article en

Abstract

Due to the scarcity and high cost of pixel-level annotations for training data, semi-supervised learning has gradually become a key solution. Most existing methods rely on consistency regularization and pseudo-label generation, often adopting multi-branch structures to generate pseudo-labels for co-training. Such approaches, however, commonly yield low-confidence pseudo-labels from perturbed inputs, which can degrade model performance. To address these challenges, we propose a novel semi-supervised segmentation framework that leverages a multi-stage training strategy, distinguishing between the training processes for labeled and unlabeled data to enhance pseudo-label reliability. This framework effectively minimizes the negative impact of multi-branch gradient interference during co-training, reducing the adverse effects of input perturbations. Furthermore, we introduce a Balanced Uncertainty Adjustment Module (BUAM) to improve pseudo-label generation, thus maximizing data utilization efficiency. By enhancing model stability and producing more reliable pseudo-labels, the proposed multi-stage approach offers a clear advantage over existing methods. Extensive experiments on the ISIC and Cardiac MRI medical image datasets demonstrate the advantages and effectiveness of our framework, which outperforms the state-of-the-art methods.

Biomedical Physics & Engineering ExpressVol. 11(5)
Virtual Reality Medical Center (US), Northeastern University (CN)
Openalex Percentile: Top 84%
Advanced Neural Network Applications
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Semi-supervised medical image segmentation based on multi-stage iterative training and high-confidence pseudo-labeling — Haojie Tao, Keming Mao, et al. · Biomedical Physics & Engineering Express (2025) | TGRS Research Map | TGRS