De novo design and structure of a peptide–centric TCR mimic binding module

T cell receptor (TCR) mimics offer a promising platform for tumor-specific targeting of peptide-major histocompatibility complex (pMHC) in cancer immunotherapy. In this study, we designed a de novo α-helical TCR mimic (TCRm) specific for the NY-ESO-1 peptide presented by human leukocyte antigen (HLA)-A*02, achieving high on-target specificity with nanomolar affinity (dissociation constant <i>K</i><sub>d</sub> = 9.5 nM). The structure of the TCRm-pMHC complex at 2.05-Å resolution revealed a rigid TCR-like docking mode with an unusual degree of focus on the up-facing NY-ESO-1 side chains, suggesting the potential for reduced off-target reactivity. Indeed, a structure-informed in silico screen of 14,363 HLA-A*02 peptides correctly predicted two off-target peptides, yet our TCRm maintained peptide selectivity and cytotoxicity as a T cell engager. These results represent a path for precision targeting of tumor antigens with peptide-focused α-helical TCR mimics.

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Publication Details

Journal
Science
Published
2025-07-24
DOI
https://doi.org/10.1126/science.adv3813
Citations
12
Primary Topic
Immunotherapy and Immune Responses
Type
article
Field-Weighted Citation Impact
9.57
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article

De novo design and structure of a peptide–centric TCR mimic binding module

Kevin M. Jude, Matthias Obenaus, Karsten D. Householder, Arthur Deng et al.
12 citations
Science
Immunotherapy and Immune Responses
9.57
article

De novo design and structure of a peptide–centric TCR mimic binding module

Kevin M. Jude, Matthias Obenaus, Karsten D. Householder, Arthur Deng, Xinyu Xiang, K. Christopher García, Steven C. Wilson, Nan Wang, Yang Zhao, Xiaojing Chen
article en
12 citations

Abstract

T cell receptor (TCR) mimics offer a promising platform for tumor-specific targeting of peptide-major histocompatibility complex (pMHC) in cancer immunotherapy. In this study, we designed a de novo α-helical TCR mimic (TCRm) specific for the NY-ESO-1 peptide presented by human leukocyte antigen (HLA)-A*02, achieving high on-target specificity with nanomolar affinity (dissociation constant <i>K</i><sub>d</sub> = 9.5 nM). The structure of the TCRm-pMHC complex at 2.05-Å resolution revealed a rigid TCR-like docking mode with an unusual degree of focus on the up-facing NY-ESO-1 side chains, suggesting the potential for reduced off-target reactivity. Indeed, a structure-informed in silico screen of 14,363 HLA-A*02 peptides correctly predicted two off-target peptides, yet our TCRm maintained peptide selectivity and cytotoxicity as a T cell engager. These results represent a path for precision targeting of tumor antigens with peptide-focused α-helical TCR mimics.

ScienceVol. 389(6758)
Howard Hughes Medical Institute (US), Stanford University (US)
Good health and well-being
Openalex Percentile: Top 2%
Immunotherapy and Immune Responses
9.57
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