Evaluation of sequencing reads at scale using rdeval
Rdeval is implemented in C++ for data processing and in R for data visualization. Precompiled releases (Linux, MacOS, Windows) and commented source code for rdeval are available under MIT license at https://github.com/vgl-hub/rdeval. Documentation is available on ReadTheDocs (https://rdeval-documentation.readthedocs.io). Rdeval is also available in Bioconda and in Galaxy (https://usegalaxy.org). An automated test workflow ensures the consistency of software updates.
Authors
- Richard Burhans
- Jack A Medico (ORCID: https://orcid.org/0000-0003-1855-0855)
- Erick Duarte
- Giulio Formenti (ORCID: https://orcid.org/0000-0002-7554-5991)
- Erich D. Jarvis (ORCID: https://orcid.org/0000-0001-8931-5049)
- Patrik Smeds
- Jennifer Balacco (ORCID: https://orcid.org/0000-0001-7102-1632)
- Bonhwang Koo (ORCID: https://orcid.org/0000-0002-5181-6267)
- Marco Sollitto (ORCID: https://orcid.org/0000-0002-0806-1460)
- Nadolina Brajuka (ORCID: https://orcid.org/0009-0008-6639-8791)
- Alice Maria Giani (ORCID: https://orcid.org/0000-0001-8805-7826)
- ANTON Y NEKRUTENKO (ORCID: https://orcid.org/0000-0002-5987-8032)
- Eugene Wimberly Myers (ORCID: https://orcid.org/0000-0002-6580-7839)
- Kirsty McCaffrey (ORCID: https://orcid.org/0009-0005-4760-6653)
Institutions
- Pennsylvania State University (US)
- Cornell University (US)
- MIND Research Institute (US)
- Interuniversity Consortium for Magnetic Resonance (IT)
- University of Florence (IT)
- Rockefeller University (US)
Publication Details
- Journal
- Bioinformatics
- Published
- 2025-07-19
- DOI
- https://doi.org/10.1093/bioinformatics/btaf416
- Citations
- 1
- Primary Topic
- Genomics and Phylogenetic Studies
- Type
- article
- Field-Weighted Citation Impact
- 0.81
Funders
- National Institutes of Health