Csv2xyd: A Python Software for Processing Large Biodiversity Datasets for Endemism Analysis

Biodiversity repositories are important in biogeography and conservation investigations. A key component of biogeographical research is identifying areas of endemism, which involves examining multiple datasets. Due to this, we developed csv2xyd a Python software with a graphical user interface to process data from CSV to XYD format for endemism analysis. The software detects species with typographical errors, checks taxonomic inconsistencies, removes duplicate occurrences, and offers filtering options. After being tested on large datasets, csv2xyd proved to be an effective tool for data handling. This software enhances the integration of several biodiversity repositories for endemism analysis by optimizing data processing workflow.

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Publication Details

Journal
Journal of Open Research Software
Published
2025-01-01
DOI
https://doi.org/10.5334/jors.538
Primary Topic
Scarabaeidae Beetle Taxonomy and Biogeography
Type
article
Field-Weighted Citation Impact
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article

Csv2xyd: A Python Software for Processing Large Biodiversity Datasets for Endemism Analysis

Ana Soto-Vivas, Jonathan Liria
Journal of Open Research Software
Scarabaeidae Beetle Taxonomy and Biogeography
article

Csv2xyd: A Python Software for Processing Large Biodiversity Datasets for Endemism Analysis

Ana Soto-Vivas, Jonathan Liria
article en

Abstract

Biodiversity repositories are important in biogeography and conservation investigations. A key component of biogeographical research is identifying areas of endemism, which involves examining multiple datasets. Due to this, we developed csv2xyd a Python software with a graphical user interface to process data from CSV to XYD format for endemism analysis. The software detects species with typographical errors, checks taxonomic inconsistencies, removes duplicate occurrences, and offers filtering options. After being tested on large datasets, csv2xyd proved to be an effective tool for data handling. This software enhances the integration of several biodiversity repositories for endemism analysis by optimizing data processing workflow.

Journal of Open Research SoftwareVol. 13
Life in Land
Openalex Percentile: Top 92%
Scarabaeidae Beetle Taxonomy and Biogeography
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