Cellular porosity in dentin exhibits complex network characteristics with spatio-temporal fluctuations

According to the current hydrodynamic theory, teeth sensitivity is mediated by odontoblast cell processes which can be activated by fluid flow in the pericellular space of bulk dentin. To better understand the possible spatial extent of such phenomena, we investigated the topology and connectivity of dentinal porosity of a healthy human tooth. Using confocal fluorescence microscopy, we modeled the porosity as a spatial graph with edges representing dentinal tubules or lateral branches and nodes defining their connections. A large fraction of porosity channels in crown dentin was found to be interconnected, with 47% of nodes linked in a single component over a millimetric distance from the dentin-enamel junction (DEJ). However, significant differences in network topology were also observed. A sharp transition in connectivity from 83% to 43% occurred at 300 µm from the DEJ, which corresponds to an early stage of tooth formation. This was reflected in all graph metrics investigated, in particular the network resilience which dropped by a factor 2. To test the robustness of our observations, an in-depth analysis of potential remaining biases of the graph extraction was conducted. Most graph metrics considered were found to be within a 10% precision range from a manually annotated ground truth. However, path metrics, which characterize transport properties, proved very sensitive to network defects. Residual errors were classified in 4 topological classes related to fluorescence staining and confocal detection efficiency, instrumental resolution and image processing. Their relative importance was estimated using statistical and physical graph attack simulations in a broad experimental range. Our modeling thus provides a practical framework to estimate the interpretability of calculated graph metrics for a given experimental microscopy setup and image processing pipeline. Overall, this study shows that dentin porosity exhibits typical characteristics of a complex network and quantitatively emphasize the importance of the smallest lateral branches. Our results could be used to model fluid flow more accurately in order to better understand mechanosensing by odontoblasts in dentin.

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PLoS ONE
Published
2025-07-16
DOI
https://doi.org/10.1371/journal.pone.0327030
Citations
1
Primary Topic
Topological and Geometric Data Analysis
Type
article
Field-Weighted Citation Impact
1.50

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article

Cellular porosity in dentin exhibits complex network characteristics with spatio-temporal fluctuations

Elisabeth Dursun, Aurélien Gourrier, Elsa Vennat, Lucas Chatelain et al.
1 citations
PLoS ONE
Topological and Geometric Data Analysis
1.50
article

Cellular porosity in dentin exhibits complex network characteristics with spatio-temporal fluctuations

Elisabeth Dursun, Aurélien Gourrier, Elsa Vennat, Lucas Chatelain, Nicolas Tremblay, David Rousseau
article en
1 citations

Abstract

According to the current hydrodynamic theory, teeth sensitivity is mediated by odontoblast cell processes which can be activated by fluid flow in the pericellular space of bulk dentin. To better understand the possible spatial extent of such phenomena, we investigated the topology and connectivity of dentinal porosity of a healthy human tooth. Using confocal fluorescence microscopy, we modeled the porosity as a spatial graph with edges representing dentinal tubules or lateral branches and nodes defining their connections. A large fraction of porosity channels in crown dentin was found to be interconnected, with 47% of nodes linked in a single component over a millimetric distance from the dentin-enamel junction (DEJ). However, significant differences in network topology were also observed. A sharp transition in connectivity from 83% to 43% occurred at 300 µm from the DEJ, which corresponds to an early stage of tooth formation. This was reflected in all graph metrics investigated, in particular the network resilience which dropped by a factor 2. To test the robustness of our observations, an in-depth analysis of potential remaining biases of the graph extraction was conducted. Most graph metrics considered were found to be within a 10% precision range from a manually annotated ground truth. However, path metrics, which characterize transport properties, proved very sensitive to network defects. Residual errors were classified in 4 topological classes related to fluorescence staining and confocal detection efficiency, instrumental resolution and image processing. Their relative importance was estimated using statistical and physical graph attack simulations in a broad experimental range. Our modeling thus provides a practical framework to estimate the interpretability of calculated graph metrics for a given experimental microscopy setup and image processing pipeline. Overall, this study shows that dentin porosity exhibits typical characteristics of a complex network and quantitatively emphasize the importance of the smallest lateral branches. Our results could be used to model fluid flow more accurately in order to better understand mechanosensing by odontoblasts in dentin.

PLoS ONEVol. 20(7)
Institut polytechnique de Grenoble (FR), Centre National de la Recherche Scientifique (FR), Inserm (FR), Université Paris Cité (FR), Université Paris-Saclay (FR), Sorbonne Paris Cité (FR), Centre for Arctic Gas Hydrate, Environment and Climate (NO), Assistance Publique – Hôpitaux de Paris (FR), CentraleSupélec (FR), Laboratoire Interdisciplinaire de Physique (FR), Laboratoire Angevin de Recherche en Mathématiques (FR), GIPSA-Lab (FR), Hôpitaux Universitaires Henri-Mondor (FR), Laboratoire de Mécanique Paris-Saclay (FR), Université d'Angers (FR), UiT The Arctic University of Norway (NO), Université Grenoble Alpes (FR)
Human Frontier Science Program, Institut National de la Santé et de la Recherche Médicale
Openalex Percentile: Top 15%
Topological and Geometric Data Analysis
1.50
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