Probing the Mechanism of <scp>l</scp>-DOPA 2,3-Dioxygenase Using Synthetic Derivatives of 3,4-Dihydroxyhydrocinnamic Acid

Extradiol dioxygenase chemistry is well-known in the degradation of natural and man-made sources of aromatic carbon; however, the extent to which biosynthetic dioxygenases like l-DOPA 2,3-dioxygenase can degrade lignin-derived aromatic carbon has not been examined. To understand if l-DOPA 2,3-dioxygenases also demonstrate a capacity or even a proclivity to cleave lignin-derived aromatic carbon into semialdehyde products, the l-DOPA 2,3-dioxygenase reaction was evaluated with derivatives of 3,4-dihydroxyhydrocinnamic acid (DHHCA), also known as hydrocaffeic acid, a catecholic example of lignin-derived carbon. DHHCA analogues, 3-(2-bromo-4,5-dihydroxyphenyl)-propanoic acid (6-bromoDHHCA, <b>4</b>), 3-(2-cyano-4,5-dihydroxyphenyl)-propanoic acid (6-cyanoDHHCA, <b>5</b>), and 3-(4,5-dihydroxy-2-nitrophenyl)-propanoic acid (6-nitroDHHCA, <b>6</b>) were synthesized, their redox potential and p<i>K</i> <sub>a</sub> values were evaluated, and their activity as enzymatic substrates was characterized on two l-DOPA 2,3-dioxygenases from <i>S. lincolnensis</i> and <i>S. hygroscopicus</i> <i>jingganensis</i>. The results indicate that DHHCA, similar in p<i>K</i> <sub>a</sub> values, but smaller and more readily oxidized compared to l-DOPA, is a competent substrate for both enzymes. 6-BromoDHHCA is also readily oxidized, and due to its larger size, is more readily accommodated and cleaved in the more spacious active site of the <i>S. hygroscopicus</i> <i>jingganensis</i> l-DOPA 2,3-dioxygenase versus the <i>S. lincolnensis</i> enzyme. 6-CyanoDHHCA is acidic and difficult to oxidize and its interaction was characterized by significant enzyme inactivation as observed in the presteady state. These results argue for an integrated understanding of substrate size, redox potential, and active site capacity to understand substrate-enzyme compatibility and provide actionable insights to fuel the pursuit of dioxygenase catalysts that robustly cleave 6-X-DHHCA and other synthetically modified lignin-derived catecholic monomers as starting points for functionalized semialdehydes.

Authors

Institutions

Publication Details

Journal
ACS Omega
Published
2025-07-16
DOI
https://doi.org/10.1021/acsomega.5c03691
Citations
1
Primary Topic
Pharmacogenetics and Drug Metabolism
Type
article
Field-Weighted Citation Impact
1.56

Funders

Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Probing the Mechanism of l-DOPA 2,3-Dioxygenase Using Synthetic Derivatives of 3,4-Dihydroxyhydrocinnamic Acid

Ryan N. Marasco, David Strzeminski, Mark Betonio, Keri L. Colabroy et al.
1 citations
ACS Omega
Pharmacogenetics and Drug Metabolism
1.56
article

Probing the Mechanism of l-DOPA 2,3-Dioxygenase Using Synthetic Derivatives of 3,4-Dihydroxyhydrocinnamic Acid

Ryan N. Marasco, David Strzeminski, Mark Betonio, Keri L. Colabroy, Larryn W. Peterson, Gisela Xhafkollari, Jessica Steiner, Sebastian Leyes Porello, Jon R. Cohen, Emma G. Gruss, Amen Demisew, Jennifer D. Bui
article en
1 citations

Abstract

Extradiol dioxygenase chemistry is well-known in the degradation of natural and man-made sources of aromatic carbon; however, the extent to which biosynthetic dioxygenases like l-DOPA 2,3-dioxygenase can degrade lignin-derived aromatic carbon has not been examined. To understand if l-DOPA 2,3-dioxygenases also demonstrate a capacity or even a proclivity to cleave lignin-derived aromatic carbon into semialdehyde products, the l-DOPA 2,3-dioxygenase reaction was evaluated with derivatives of 3,4-dihydroxyhydrocinnamic acid (DHHCA), also known as hydrocaffeic acid, a catecholic example of lignin-derived carbon. DHHCA analogues, 3-(2-bromo-4,5-dihydroxyphenyl)-propanoic acid (6-bromoDHHCA, <b>4</b>), 3-(2-cyano-4,5-dihydroxyphenyl)-propanoic acid (6-cyanoDHHCA, <b>5</b>), and 3-(4,5-dihydroxy-2-nitrophenyl)-propanoic acid (6-nitroDHHCA, <b>6</b>) were synthesized, their redox potential and p<i>K</i> <sub>a</sub> values were evaluated, and their activity as enzymatic substrates was characterized on two l-DOPA 2,3-dioxygenases from <i>S. lincolnensis</i> and <i>S. hygroscopicus</i> <i>jingganensis</i>. The results indicate that DHHCA, similar in p<i>K</i> <sub>a</sub> values, but smaller and more readily oxidized compared to l-DOPA, is a competent substrate for both enzymes. 6-BromoDHHCA is also readily oxidized, and due to its larger size, is more readily accommodated and cleaved in the more spacious active site of the <i>S. hygroscopicus</i> <i>jingganensis</i> l-DOPA 2,3-dioxygenase versus the <i>S. lincolnensis</i> enzyme. 6-CyanoDHHCA is acidic and difficult to oxidize and its interaction was characterized by significant enzyme inactivation as observed in the presteady state. These results argue for an integrated understanding of substrate size, redox potential, and active site capacity to understand substrate-enzyme compatibility and provide actionable insights to fuel the pursuit of dioxygenase catalysts that robustly cleave 6-X-DHHCA and other synthetically modified lignin-derived catecholic monomers as starting points for functionalized semialdehydes.

ACS OmegaVol. 10(29)
Rhodes College (US), Muhlenberg College (US)
Division of Chemistry
Clean water and sanitation
Openalex Percentile: Top 17%
Pharmacogenetics and Drug Metabolism
1.56
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.