Implicit neural representations for chemical reaction paths

We show that neural networks can be optimized to represent minimum energy paths as continuous functions, offering a flexible alternative to discrete path-search methods such as Nudged Elastic Band (NEB). Our approach parameterizes reaction paths with a network trained on a loss function that discards tangential energy gradients and enables instant estimation of the transition state. We first validate the method on two-dimensional potentials and then demonstrate its advantages over NEB on challenging atomistic systems where (i) poor initial guesses yield unphysical paths, (ii) multiple competing paths exist, or (iii) the reaction follows a complex multi-step mechanism. Results highlight the versatility of the method: for instance, a simple adjustment to the sampling strategy during optimization can help escape local-minimum solutions. Finally, in a low-dimensional setting, we demonstrate that a single neural network can learn from existing paths and generalize to unseen systems, showing promise for a universal reaction path representation.

Authors

Institutions

Publication Details

Journal
The Journal of Chemical Physics
Published
2025-07-16
DOI
https://doi.org/10.1063/5.0267023
Citations
2
Primary Topic
Machine Learning in Materials Science
Type
article
Field-Weighted Citation Impact
1.04
Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Implicit neural representations for chemical reaction paths

Philip H. S. Torr, Guangrun Wang, Kalyan Ramakrishnan, Lars L. Schaaf et al.
2 citations
The Journal of Chemical Physics
Machine Learning in Materials Science
1.04
article

Implicit neural representations for chemical reaction paths

Philip H. S. Torr, Guangrun Wang, Kalyan Ramakrishnan, Lars L. Schaaf, Chen Lin
article en
2 citations

Abstract

We show that neural networks can be optimized to represent minimum energy paths as continuous functions, offering a flexible alternative to discrete path-search methods such as Nudged Elastic Band (NEB). Our approach parameterizes reaction paths with a network trained on a loss function that discards tangential energy gradients and enables instant estimation of the transition state. We first validate the method on two-dimensional potentials and then demonstrate its advantages over NEB on challenging atomistic systems where (i) poor initial guesses yield unphysical paths, (ii) multiple competing paths exist, or (iii) the reaction follows a complex multi-step mechanism. Results highlight the versatility of the method: for instance, a simple adjustment to the sampling strategy during optimization can help escape local-minimum solutions. Finally, in a low-dimensional setting, we demonstrate that a single neural network can learn from existing paths and generalize to unseen systems, showing promise for a universal reaction path representation.

The Journal of Chemical PhysicsVol. 163(3)
University of Cambridge (GB), University of Oxford (GB), Bridge University (SS), Science Oxford (GB)
Affordable and clean energy
Openalex Percentile: Top 24%
Machine Learning in Materials Science
1.04
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.

Implicit neural representations for chemical reaction paths — Philip H. S. Torr, Guangrun Wang, et al. · The Journal of Chemical Physics (2025) | TGRS Research Map | TGRS