Computational Investigation of Cytochrome P450-Catalyzed Oxetane Formation in Taxol Biosynthesis

Paclitaxel (Taxol) is widely recognized as one of the most effective natural anticancer drugs, yet its production is limited by its scarce natural supply and the low yields obtained from its chemical synthesis. One of the most puzzling steps in its biosynthesis is the formation of the oxetane-containing D-ring, a key structural element necessary for its microtubule binding and anticancer activity. In our study, we use density functional theory (DFT) calculations to explore how cytochrome P450 drives this critical transformation. We focus on two proposed reaction pathways─the ene-acetoxy (EA) pathway and the ene-hydroxy (EH) pathway─and investigate how they operate on both the high-spin (quartet) and low-spin (doublet) states of Compound I. Our results indicate that on the high-spin surface, epoxidation occurs in two steps, with the first step being the slow, rate-limiting part of the reaction, while on the low-spin surface, the process proceeds in a single step. The computed activation energies and the observed stability of the epoxide intermediates support the idea that enzyme-catalyzed epoxidation is a pivotal intermediate in the formation of the oxetane ring during Taxol biosynthesis. These mechanistic insights not only enhance our understanding of this complex biosynthetic pathway but also have the potential to guide future efforts aimed at improving Taxol production.

Authors

Institutions

Publication Details

Journal
Biochemistry
Published
2025-07-14
DOI
https://doi.org/10.1021/acs.biochem.5c00175
Primary Topic
Metal-Catalyzed Oxygenation Mechanisms
Type
article
Field-Weighted Citation Impact
0.00
Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

Computational Investigation of Cytochrome P450-Catalyzed Oxetane Formation in Taxol Biosynthesis

Parayil Kumaran Ajikumar, Anakuthil Anoop, Rohan Sharma, Subhajit Mandal et al.
Biochemistry
Metal-Catalyzed Oxygenation Mechanisms
article

Computational Investigation of Cytochrome P450-Catalyzed Oxetane Formation in Taxol Biosynthesis

Parayil Kumaran Ajikumar, Anakuthil Anoop, Rohan Sharma, Subhajit Mandal, Surajit Nandi, Pankaz K. Sharma
article en

Abstract

Paclitaxel (Taxol) is widely recognized as one of the most effective natural anticancer drugs, yet its production is limited by its scarce natural supply and the low yields obtained from its chemical synthesis. One of the most puzzling steps in its biosynthesis is the formation of the oxetane-containing D-ring, a key structural element necessary for its microtubule binding and anticancer activity. In our study, we use density functional theory (DFT) calculations to explore how cytochrome P450 drives this critical transformation. We focus on two proposed reaction pathways─the ene-acetoxy (EA) pathway and the ene-hydroxy (EH) pathway─and investigate how they operate on both the high-spin (quartet) and low-spin (doublet) states of Compound I. Our results indicate that on the high-spin surface, epoxidation occurs in two steps, with the first step being the slow, rate-limiting part of the reaction, while on the low-spin surface, the process proceeds in a single step. The computed activation energies and the observed stability of the epoxide intermediates support the idea that enzyme-catalyzed epoxidation is a pivotal intermediate in the formation of the oxetane ring during Taxol biosynthesis. These mechanistic insights not only enhance our understanding of this complex biosynthetic pathway but also have the potential to guide future efforts aimed at improving Taxol production.

BiochemistryVol. 64(15)
Indian Institute of Technology Kharagpur (IN), Kerala University of Health Sciences (IN), Cotton University (IN), Manus Bio (United States) (US), Digital Science (United States) (US)
Zero hunger
Openalex Percentile: Top 86%
Metal-Catalyzed Oxygenation Mechanisms
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.

Computational Investigation of Cytochrome P450-Catalyzed Oxetane Formation in Taxol Biosynthesis — Parayil Kumaran Ajikumar, Anakuthil Anoop, et al. · Biochemistry (2025) | TGRS Research Map | TGRS