The complete mitochondrial genome of sand anemone, <i>Paracondylactis hertwigi</i> (Wassilieff, 1908)

This study reports the complete mitochondrial genome of <i>Paracondylactis hertwigi</i> (Actiniidae) for the first time. The mitogenome is 19,880 bp in length and contains 17 annotated genes, including 13 protein-coding genes, one nonconventional mitochondrial protein gene (ORF), two ribosomal RNA genes, and two transfer RNA genes. The gene content, order, and genome length are consistent with those of other sea anemones. Notably, the <i>COX1</i> and <i>ND5</i> genes each consist of two exons separated by an intron, with <i>ND1</i> and <i>ND3</i> genes encoded within the <i>ND5</i> intron, confirming the conservation of this unique mitochondrial genomic structure in Actiniaria. Phylogenetic analysis revealed that <i>Paracondylactis</i> is paraphyletic, with <i>P. sinensis</i> clustering outside the genus alongside species of the family Phymanthidae. These results align with previous findings of paraphyly within Actiniidae and support the hypothesis that the family is polyphyletic within the superfamily Actinioidea, reflecting limitations in morphology-based classifications. Further studies integrating morphological and molecular phylogenetic approaches are needed to clarify the taxonomic relationships within the genus <i>Paracondylactis</i>. Additionally, the mitogenomic data of <i>P. hertwigi</i> may serve as a valuable resource for the genetic management and conservation of tidal flat organisms in Korea, which are increasingly threatened by coastal development and climate change.