Highly parallel optimisation of chemical reactions through automation and machine intelligence
We report the development and application of a scalable machine learning (ML) framework (Minerva) for highly parallel multi-objective reaction optimisation with automated high-throughput experimentation (HTE). Minerva demonstrates robust performance with experimental data-derived benchmarks, efficiently handling large parallel batches, high-dimensional search spaces, reaction noise, and batch constraints present in real-world laboratories. Validating our approach experimentally, we apply Minerva in a 96-well HTE reaction optimisation campaign for a nickel-catalysed Suzuki reaction, tackling challenges in non-precious metal catalysis. Our approach effectively navigates the complex reaction landscape with unexpected chemical reactivity, outperforming traditional experimentalist-driven methods. Extending to industrial applications, we deploy Minerva in pharmaceutical process development, successfully optimising two active pharmaceutical ingredient (API) syntheses. For both a Ni-catalysed Suzuki coupling and a Pd-catalysed Buchwald-Hartwig reaction, our approach identifies multiple conditions achieving >95 area percent (AP) yield and selectivity, directly translating to improved process conditions at scale.
Authors
- Philippe Schwaller (ORCID: https://orcid.org/0000-0003-3046-6576)
- Raphael Bigler (ORCID: https://orcid.org/0000-0003-1898-9112)
- Siu Lun Chau
- Kurt Püntener (ORCID: https://orcid.org/0000-0003-1584-0451)
- Joshua W. Sin
- Ryan P. Burwood
Institutions
- Roche (Switzerland) (CH)
- Rational (Germany) (DE)
- Helmholtz Center for Information Security (DE)
- École Polytechnique Fédérale de Lausanne (CH)
Publication Details
- Journal
- Nature Communications
- Published
- 2025-07-12
- DOI
- https://doi.org/10.1038/s41467-025-61803-0
- Citations
- 11
- Primary Topic
- Machine Learning in Materials Science
- Type
- article
- Field-Weighted Citation Impact
- 5.70
Funders
- National Science Foundation
- F. Hoffmann-La Roche
- Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung