Chemical circularization of in vitro transcribed RNA for exploring circular mRNA design
Circularization is an important step for therapeutic messenger RNA (mRNA) enhancements. Current enzymatic and ribozymatic-based circularization methods face limitations including sequence constraints, purification challenges, and sub-optimal biological activity. Chemical strategies, while promising, have been restricted to short RNA sequences. Here, we report a method for chemically circularized in vitro transcribed RNAs of various lengths (chem-circRNAs; 35-4000 nt) with circularization efficiencies reaching up to 60%. This approach leverages a 5' ethylenediamine modification and a periodate-oxidized 3' end to drive intramolecular reductive amination. We demonstrate that this method is applicable to various sequences and modification compatible. We report the effective separation methods of chem-circRNAs from their linear precursors. We show that protein-coding chem-circRNAs are translationally active in cells and exhibit increased durability, like enzymatically circularized mRNAs. Furthermore, our method allows incorporation of functional modifications, including endocyclic N7-methylguanosine cap and N1-methylpseudouridine, enabling access to chemically defined translationally active circRNAs for therapeutic applications.
Authors
- Jacek Jemielity (ORCID: https://orcid.org/0000-0001-7633-788X)
- Adam A. Rajkiewicz (ORCID: https://orcid.org/0000-0002-9550-6287)
- Zofia Pilch (ORCID: https://orcid.org/0000-0002-8214-7158)
- Tomasz Śpiewla (ORCID: https://orcid.org/0000-0002-6542-3966)
- Katarzyna Debiec (ORCID: https://orcid.org/0000-0003-3704-4771)
- Jakub Gołąb (ORCID: https://orcid.org/0000-0002-2830-5100)
- Małgorzata Wąsińska-Kałwa (ORCID: https://orcid.org/0000-0003-3509-9103)
- Marcin Warmiński
- Karol Czubak (ORCID: https://orcid.org/0000-0002-0489-8773)
- Dominika Nowis (ORCID: https://orcid.org/0000-0003-2748-9523)
- Joanna Kowalska (ORCID: https://orcid.org/0000-0002-9174-7999)
- Andrzej Dziembowski (ORCID: https://orcid.org/0000-0001-8492-7572)
- Adam Mamot (ORCID: https://orcid.org/0000-0001-8508-2866)
- Kacper Siekan
- Marta Szulc-Gasiorowska
Institutions
- Medical University of Warsaw (PL)
- International Institute of Molecular and Cell Biology (PL)
- United Technologies Corporation (Poland) (PL)
- Max Planck Institute of Biochemistry (DE)
- University of Warsaw (PL)
Publication Details
- Journal
- Nature Communications
- Published
- 2025-07-12
- DOI
- https://doi.org/10.1038/s41467-025-61775-1
- Citations
- 11
- Primary Topic
- Circular RNAs in diseases
- Type
- article
- Field-Weighted Citation Impact
- 8.87