Chemical circularization of in vitro transcribed RNA for exploring circular mRNA design

Circularization is an important step for therapeutic messenger RNA (mRNA) enhancements. Current enzymatic and ribozymatic-based circularization methods face limitations including sequence constraints, purification challenges, and sub-optimal biological activity. Chemical strategies, while promising, have been restricted to short RNA sequences. Here, we report a method for chemically circularized in vitro transcribed RNAs of various lengths (chem-circRNAs; 35-4000 nt) with circularization efficiencies reaching up to 60%. This approach leverages a 5' ethylenediamine modification and a periodate-oxidized 3' end to drive intramolecular reductive amination. We demonstrate that this method is applicable to various sequences and modification compatible. We report the effective separation methods of chem-circRNAs from their linear precursors. We show that protein-coding chem-circRNAs are translationally active in cells and exhibit increased durability, like enzymatically circularized mRNAs. Furthermore, our method allows incorporation of functional modifications, including endocyclic N7-methylguanosine cap and N1-methylpseudouridine, enabling access to chemically defined translationally active circRNAs for therapeutic applications.

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Publication Details

Journal
Nature Communications
Published
2025-07-12
DOI
https://doi.org/10.1038/s41467-025-61775-1
Citations
11
Primary Topic
Circular RNAs in diseases
Type
article
Field-Weighted Citation Impact
8.87
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article

Chemical circularization of in vitro transcribed RNA for exploring circular mRNA design

Jacek Jemielity, Adam A. Rajkiewicz, Zofia Pilch, Tomasz Śpiewla et al.
11 citations
Nature Communications
Circular RNAs in diseases
8.87
article

Chemical circularization of in vitro transcribed RNA for exploring circular mRNA design

Jacek Jemielity, Adam A. Rajkiewicz, Zofia Pilch, Tomasz Śpiewla, Katarzyna Debiec, Jakub Gołąb, Małgorzata Wąsińska-Kałwa, Marcin Warmiński, Karol Czubak, Dominika Nowis, Joanna Kowalska, Andrzej Dziembowski, Adam Mamot, Kacper Siekan, Marta Szulc-Gasiorowska
article en
11 citations

Abstract

Circularization is an important step for therapeutic messenger RNA (mRNA) enhancements. Current enzymatic and ribozymatic-based circularization methods face limitations including sequence constraints, purification challenges, and sub-optimal biological activity. Chemical strategies, while promising, have been restricted to short RNA sequences. Here, we report a method for chemically circularized in vitro transcribed RNAs of various lengths (chem-circRNAs; 35-4000 nt) with circularization efficiencies reaching up to 60%. This approach leverages a 5' ethylenediamine modification and a periodate-oxidized 3' end to drive intramolecular reductive amination. We demonstrate that this method is applicable to various sequences and modification compatible. We report the effective separation methods of chem-circRNAs from their linear precursors. We show that protein-coding chem-circRNAs are translationally active in cells and exhibit increased durability, like enzymatically circularized mRNAs. Furthermore, our method allows incorporation of functional modifications, including endocyclic N7-methylguanosine cap and N1-methylpseudouridine, enabling access to chemically defined translationally active circRNAs for therapeutic applications.

Nature CommunicationsVol. 16(1)
Medical University of Warsaw (PL), International Institute of Molecular and Cell Biology (PL), United Technologies Corporation (Poland) (PL), Max Planck Institute of Biochemistry (DE), University of Warsaw (PL)
Zero hunger
Openalex Percentile: Top 2%
Circular RNAs in diseases
8.87
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