High-dimensional density-based clustering using locality-sensitive hashing

The DBSCAN algorithm is a popular density-based clustering method to find clusters of arbitrary shapes without requiring an initial guess on the number of clusters. While there are methods to run DBSCAN efficiently in low-dimensional data in near-linear time, there remains a need for an efficient DBSCAN algorithm that scales to high-dimensional data. The bottleneck in highdimensional data is that the range queries necessary in carrying out the algorithm suffer from the curse of dimensionality. In this paper we present the SRRDBSCAN algorithm. This algorithm is an implementation of approximate DBSCAN using locality-sensitive hashing. We prove sub-quadratic running time bounds under reasonable assumptions about the data. An important ingredient in the design of the data structure is the use of a multi-level LSH data structure, which automatically adapts to the density of data points. An extensive empirical analysis shows that the approximation does not significantly impact the quality of the clustering found by the algorithm as compared to the exact DBSCAN clustering. Moreover, our algorithm is competitive with other approaches even in low-dimensional settings, and thus provides a general-purpose DBSCAN implementation for arbitrary data.

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Publication Details

Journal
University of Southern Denmark Research Portal (University of Southern Denmark)
Published
2025-01-01
DOI
https://doi.org/10.48786/edbt.2025.56
Primary Topic
Advanced Image and Video Retrieval Techniques
Type
article
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article

High-dimensional density-based clustering using locality-sensitive hashing

Arthur Zimek, Martin Aumüller, Camilla Birch Okkels, Viktor Bello Thomsen
University of Southern Denmark Research Portal (University of Southern Denmark)
Advanced Image and Video Retrieval Techniques
article

High-dimensional density-based clustering using locality-sensitive hashing

Arthur Zimek, Martin Aumüller, Camilla Birch Okkels, Viktor Bello Thomsen
article en

Abstract

The DBSCAN algorithm is a popular density-based clustering method to find clusters of arbitrary shapes without requiring an initial guess on the number of clusters. While there are methods to run DBSCAN efficiently in low-dimensional data in near-linear time, there remains a need for an efficient DBSCAN algorithm that scales to high-dimensional data. The bottleneck in highdimensional data is that the range queries necessary in carrying out the algorithm suffer from the curse of dimensionality. In this paper we present the SRRDBSCAN algorithm. This algorithm is an implementation of approximate DBSCAN using locality-sensitive hashing. We prove sub-quadratic running time bounds under reasonable assumptions about the data. An important ingredient in the design of the data structure is the use of a multi-level LSH data structure, which automatically adapts to the density of data points. An extensive empirical analysis shows that the approximation does not significantly impact the quality of the clustering found by the algorithm as compared to the exact DBSCAN clustering. Moreover, our algorithm is competitive with other approaches even in low-dimensional settings, and thus provides a general-purpose DBSCAN implementation for arbitrary data.

University of Southern Denmark Research Portal (University of Southern Denmark)
University of Southern Denmark (DK)
Advanced Image and Video Retrieval Techniques
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High-dimensional density-based clustering using locality-sensitive hashing — Arthur Zimek, Martin Aumüller, et al. · University of Southern Denmark Research Portal (University of Southern Denmark) (2025) | TGRS Research Map | TGRS