Continuous in situ synthesis of a complete set of tRNAs sustains steady-state translation in a recombinant cell-free system
Construction of a self-regenerating biochemical system is critical for building a synthetic cell. An essential step in building a self-regenerative system is producing a complete set of tRNAs for translation, which remains a significant challenge. Here, we reconstitute a complete set of 21 in vitro transcribed tRNAs and optimize their abundance to improve protein yield. Next, we show that protein expression in the PURE transcription-translation system can be achieved by in situ transcribing tRNAs from 21 linear tRNA templates or a single plasmid template. To enable synthesis of mature tRNAs from a circular template, we employ either a nicked plasmid template or T. maritima tRNase Z to post-transcriptionally process the precursor tRNAs. We ultimately achieve continuous in situ synthesis of a complete set of tRNAs capable of supporting sustained, steady-state protein expression in PURE reactions running on microfluidic chemostats. Our findings advance the development of an autopoietic biochemical system.
Authors
- Fengshi Li (ORCID: https://orcid.org/0000-0001-9874-8567)
- Sebastian J. Maerkl (ORCID: https://orcid.org/0000-0003-1917-5268)
- Amogh Kumar Baranwal (ORCID: https://orcid.org/0009-0008-1874-1786)
Institutions
- École Polytechnique Fédérale de Lausanne (CH)
Publication Details
- Journal
- Nature Communications
- Published
- 2025-07-05
- DOI
- https://doi.org/10.1038/s41467-025-61671-8
- Citations
- 8
- Primary Topic
- RNA and protein synthesis mechanisms
- Type
- article
- Field-Weighted Citation Impact
- 6.45
Funders
- National Science Foundation
- Schweizerischer Nationalfonds zur Förderung der Wissenschaftlichen Forschung