Use of Large Language Models for Cataloging Medical Reports in Reconfigurable Digital Collections

This work proposes an approach based on Large Language Models (LLMs) for creating digital collections from free-text medical reports. The approach uses instruct LLMs to extract relevant clinical terms from these reports, as well as to catalog them using the extracted terms. The cataloged reports are then integrated into a digital collection management platform, enabling further curation by clinical experts. To confirm the feasibility of the approach, we used various models associated with DeepSeek, as well as a coding model developed by Alibaba, and the experimental Clavy reconfigurable collection management platform to handle the resulting collections. The preliminary evaluation results demonstrate the feasibility of the approach, even without relying on external services that could compromise data privacy in real-world scenarios, or on particularly expensive dedicated hardware.

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Published
2025-06-18
DOI
https://doi.org/10.1109/cbms65348.2025.00173
Primary Topic
Scientific Computing and Data Management
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article
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article

Use of Large Language Models for Cataloging Medical Reports in Reconfigurable Digital Collections

Joaquín Gayoso-Cabada, Félix Buendía, José Luis Sierra
Scientific Computing and Data Management
article

Use of Large Language Models for Cataloging Medical Reports in Reconfigurable Digital Collections

Joaquín Gayoso-Cabada, Félix Buendía, José Luis Sierra
article en

Abstract

This work proposes an approach based on Large Language Models (LLMs) for creating digital collections from free-text medical reports. The approach uses instruct LLMs to extract relevant clinical terms from these reports, as well as to catalog them using the extracted terms. The cataloged reports are then integrated into a digital collection management platform, enabling further curation by clinical experts. To confirm the feasibility of the approach, we used various models associated with DeepSeek, as well as a coding model developed by Alibaba, and the experimental Clavy reconfigurable collection management platform to handle the resulting collections. The preliminary evaluation results demonstrate the feasibility of the approach, even without relying on external services that could compromise data privacy in real-world scenarios, or on particularly expensive dedicated hardware.

Universidad Complutense de Madrid (ES)
Quality Education
Openalex Percentile: Top 83%
Scientific Computing and Data Management
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Use of Large Language Models for Cataloging Medical Reports in Reconfigurable Digital Collections — Joaquín Gayoso-Cabada, Félix Buendía, et al. · (2025) | TGRS Research Map | TGRS