Semi-Automatic 3D Medical Image Segmentation Using UNet with Five-Point Extreme Guidance

Breast cancer remains the leading cause of cancerrelated mortality among women worldwide, with millions of new cases reported annually. Advances in early detection and treatment, particularly through mammography and tomographic imaging, have contributed to improved survival rates. This work presents a work-in-progress semi-automatic segmentation framework for breast lesion annotation in Digital Breast Tomosynthesis (DBT), leveraging a 3D UNet with spatial priors based on five-point user input. The method combines expert-in-the-loop interaction with deep learning, encoding four extreme boundary points and one central point as a Gaussian heatmap to guide volumetric segmentation. Evaluated preliminarily on a cohort of 81 patients from the multicenter P.I.N.K. study, the model shows promising qualitative localisation while significantly reducing annotation effort. Although quantitative metrics are not yet reported, the system is designed for clinical adaptability, with planned extensions including real-time user interaction and benchmarking against interactive segmentation baselines.

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Published
2025-06-16
DOI
https://doi.org/10.1109/smartcomp65954.2025.00048
Primary Topic
Medical Image Segmentation Techniques
Type
article
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article

Semi-Automatic 3D Medical Image Segmentation Using UNet with Five-Point Extreme Guidance

Sabrina Molinaro, Giada Anastasi, Michela Franchini, Stefania Pieroni
Medical Image Segmentation Techniques
article

Semi-Automatic 3D Medical Image Segmentation Using UNet with Five-Point Extreme Guidance

Sabrina Molinaro, Giada Anastasi, Michela Franchini, Stefania Pieroni
article en

Abstract

Breast cancer remains the leading cause of cancerrelated mortality among women worldwide, with millions of new cases reported annually. Advances in early detection and treatment, particularly through mammography and tomographic imaging, have contributed to improved survival rates. This work presents a work-in-progress semi-automatic segmentation framework for breast lesion annotation in Digital Breast Tomosynthesis (DBT), leveraging a 3D UNet with spatial priors based on five-point user input. The method combines expert-in-the-loop interaction with deep learning, encoding four extreme boundary points and one central point as a Gaussian heatmap to guide volumetric segmentation. Evaluated preliminarily on a cohort of 81 patients from the multicenter P.I.N.K. study, the model shows promising qualitative localisation while significantly reducing annotation effort. Although quantitative metrics are not yet reported, the system is designed for clinical adaptability, with planned extensions including real-time user interaction and benchmarking against interactive segmentation baselines.

Istituto di Fisiologia Clinica (IT), National Research Council (IT)
Openalex Percentile: Top 86%
Medical Image Segmentation Techniques
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Semi-Automatic 3D Medical Image Segmentation Using UNet with Five-Point Extreme Guidance — Sabrina Molinaro, Giada Anastasi, et al. · (2025) | TGRS Research Map | TGRS