Dysregulated miRNA Expression and Its Association with Immune Checkpoints in Head and Neck Cancer

<b>Background</b>: Head and neck cancer (HNC) remains a global health challenge with a poor 5-year survival rate among patients with relapsed or advanced-stage disease. Immune checkpoint blockade therapies have emerged as a promising approach to improve outcomes; however, their effectiveness is limited, with response rates of only 15-20% because of immune evasion mechanisms. MicroRNA (miRNA) dysregulation plays a key role in facilitating such immune evasion. In this study, we aim to identify specific miRNAs whose altered expression contributes to immune escape in HNC. <b>Methods</b>: We employed an integrated bioinformatics approach, incorporating differential expression analysis, survival analysis, target prediction, KEGG immune pathway analysis, a protein-protein interaction network, and the identification of hub genes using in silico tools. <b>Results</b>: Our analysis revealed that a high expression of miR-18a and miR-2355 was associated with reduced survival, with the median survival decreasing from 42.9 to 27.8 months, respectively, in advanced-stage patients. Conversely, a low expression of let-7c and miR-6510 was linked to poor prognosis, with survival decreasing from 40.1 to 19.2 months and from 50.1 to 26.8 months, respectively, across disease progression. Further pathway analysis revealed that these miRNAs are significantly involved in the regulation of key immune evasion signaling pathways, including T cell receptor, PD-L1/PD-1 checkpoint, JAK-STAT, TGF-beta, NF-kappa B, and TNF signaling pathways. Hub gene analysis identified AKT1, STAT3, NFKB1, CD4, IL2RB, TLR4, and CTLA-4 as potential dysregulated miRNA targets, with enrichment in immune-related signaling pathways. <b>Conclusions</b>: Taken together, these findings suggest that targeting these miRNAs could modulate immune evasion mechanisms and potentially enhance the efficacy of ICB therapies in HNC.

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Publication Details

Journal
Cancers
Published
2025-06-27
DOI
https://doi.org/10.3390/cancers17132169
Citations
1
Primary Topic
MicroRNA in disease regulation
Type
article
Field-Weighted Citation Impact
0.94

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article

Dysregulated miRNA Expression and Its Association with Immune Checkpoints in Head and Neck Cancer

Sanjay Gupta, Mohd Shuaib, Shashank Kumar, Gargi Sharma et al.
1 citations
Cancers
MicroRNA in disease regulation
0.94
article

Dysregulated miRNA Expression and Its Association with Immune Checkpoints in Head and Neck Cancer

Sanjay Gupta, Mohd Shuaib, Shashank Kumar, Gargi Sharma, Pramod Kumar, Diksha Saini, Ishwar Singh
article en
1 citations

Abstract

<b>Background</b>: Head and neck cancer (HNC) remains a global health challenge with a poor 5-year survival rate among patients with relapsed or advanced-stage disease. Immune checkpoint blockade therapies have emerged as a promising approach to improve outcomes; however, their effectiveness is limited, with response rates of only 15-20% because of immune evasion mechanisms. MicroRNA (miRNA) dysregulation plays a key role in facilitating such immune evasion. In this study, we aim to identify specific miRNAs whose altered expression contributes to immune escape in HNC. <b>Methods</b>: We employed an integrated bioinformatics approach, incorporating differential expression analysis, survival analysis, target prediction, KEGG immune pathway analysis, a protein-protein interaction network, and the identification of hub genes using in silico tools. <b>Results</b>: Our analysis revealed that a high expression of miR-18a and miR-2355 was associated with reduced survival, with the median survival decreasing from 42.9 to 27.8 months, respectively, in advanced-stage patients. Conversely, a low expression of let-7c and miR-6510 was linked to poor prognosis, with survival decreasing from 40.1 to 19.2 months and from 50.1 to 26.8 months, respectively, across disease progression. Further pathway analysis revealed that these miRNAs are significantly involved in the regulation of key immune evasion signaling pathways, including T cell receptor, PD-L1/PD-1 checkpoint, JAK-STAT, TGF-beta, NF-kappa B, and TNF signaling pathways. Hub gene analysis identified AKT1, STAT3, NFKB1, CD4, IL2RB, TLR4, and CTLA-4 as potential dysregulated miRNA targets, with enrichment in immune-related signaling pathways. <b>Conclusions</b>: Taken together, these findings suggest that targeting these miRNAs could modulate immune evasion mechanisms and potentially enhance the efficacy of ICB therapies in HNC.

CancersVol. 17(13)
Central University of Punjab (IN), Chaudhary Charan Singh University (IN), Maulana Azad Medical College (IN), Lok Nayak Jai Prakash Narayan Hospital (IN), National Institute of Cancer Prevention and Research (IN), Case Western Reserve University (US)
Arthritis National Research Foundation, National Research Foundation, Indian Council of Medical Research, China University of Petroleum, Beijing
No poverty
Openalex Percentile: Top 23%
MicroRNA in disease regulation
0.94
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