A Physics-Informed Approach to Dynamic Modeling and Parameter Estimation in Biotechnology

The increasing complexity of industrial biotechnology demands advanced modeling techniques capable of capturing the intricate dynamics of bioreactors. Traditional regression-based and empirical methods often fall short when confronted with the highly nonlinear behavior and limited experimental data characteristic of bioprocesses. Addressing these challenges requires a more intelligent approach�one that leverages domain knowledge to model complex bioprocess dynamics effectively, even with sparse data, while maintaining interpretability and robustness. In this study, we introduce a process-informed, data-driven methodology for modeling the dynamics of industrial bioreactors, leveraging the capabilities of the rising field of Scientific Machine Learning (SciML). Our approach leverages Physics-Informed Neural Networks (PINNs) to seamlessly integrate domain knowledge encoded in physical laws with sparse experimental data and deep learning techniques, enabling precise simulation and modeling of bioreactor operations. The framework is validated using real-world experimental data, demonstrating its capability for state and space estimation, essential for optimizing biomanufacturing processes. Our findings underscore the potential of Physics Informed Neural Networks to address the challenges of dynamic modeling in bioprocesses, paving the way for the development of intelligent, autonomous, and data-driven solutions in industrial biotechnology. This fusion of data-driven and mechanistic modeling represents a transformative step toward enhancing the efficiency, scalability, and sustainability of modern biomanufacturing practices.

Authors

Institutions

Publication Details

Journal
Systems and Control Transactions
Published
2025-06-30
DOI
https://doi.org/10.69997/sct.122347
Citations
1
Primary Topic
Model Reduction and Neural Networks
Type
article
Field-Weighted Citation Impact
1.32

Funders

Controls
|||
ALL TIME
JAN
FEB
MAR
APR
MAY
JUN
JUL
AUG
SEP
OCT
article

A Physics-Informed Approach to Dynamic Modeling and Parameter Estimation in Biotechnology

Stefanos Xenios, Antonis Kokossis, Konstantinos Mexis, Nikolaos Trokanas
1 citations
Systems and Control Transactions
Model Reduction and Neural Networks
1.32
article

A Physics-Informed Approach to Dynamic Modeling and Parameter Estimation in Biotechnology

Stefanos Xenios, Antonis Kokossis, Konstantinos Mexis, Nikolaos Trokanas
article en
1 citations

Abstract

The increasing complexity of industrial biotechnology demands advanced modeling techniques capable of capturing the intricate dynamics of bioreactors. Traditional regression-based and empirical methods often fall short when confronted with the highly nonlinear behavior and limited experimental data characteristic of bioprocesses. Addressing these challenges requires a more intelligent approach�one that leverages domain knowledge to model complex bioprocess dynamics effectively, even with sparse data, while maintaining interpretability and robustness. In this study, we introduce a process-informed, data-driven methodology for modeling the dynamics of industrial bioreactors, leveraging the capabilities of the rising field of Scientific Machine Learning (SciML). Our approach leverages Physics-Informed Neural Networks (PINNs) to seamlessly integrate domain knowledge encoded in physical laws with sparse experimental data and deep learning techniques, enabling precise simulation and modeling of bioreactor operations. The framework is validated using real-world experimental data, demonstrating its capability for state and space estimation, essential for optimizing biomanufacturing processes. Our findings underscore the potential of Physics Informed Neural Networks to address the challenges of dynamic modeling in bioprocesses, paving the way for the development of intelligent, autonomous, and data-driven solutions in industrial biotechnology. This fusion of data-driven and mechanistic modeling represents a transformative step toward enhancing the efficiency, scalability, and sustainability of modern biomanufacturing practices.

Systems and Control TransactionsVol. 4
National Technical University of Athens (GR)
European Commission
Openalex Percentile: Top 18%
Model Reduction and Neural Networks
1.32
AI Navigator

Ask Laika to Summarize, Analyze, and Connect papers live on the map.

Summarize Papers & Methodologies

Extract key findings, datasets, and comparative methods across publications.

Benchmark Rankings & Visual Analytics

Rank top research institutions, authors, funders, topics, and journals by Field-Weighted Citation Impact (FWCI) and paper volume with instant charts.

Connect Distant Disciplines

Bridge topological clusters on the map to find hidden collaborative intersections.

A Physics-Informed Approach to Dynamic Modeling and Parameter Estimation in Biotechnology — Stefanos Xenios, Antonis Kokossis, et al. · Systems and Control Transactions (2025) | TGRS Research Map | TGRS