Design and SAR Analysis of Phenylboronic Acid-Based Inhibitors for Sensitizing KPC-2-Producing <i>Klebsiella pneumoniae</i> to β-Lactam Antibiotics

The global threat posed by multidrug-resistant bacteria, particularly those producing KPC-2 carbapenemases, has compromised the effectiveness of carbapenems, the last-resort antibiotics. To address this, we utilized a bioisosteric replacement approach to synthesize phenylboronic acid (PBA) derivatives targeting KPC-2. The enzyme kinetics study revealed that electron-withdrawing substituents enhanced the residence time of lead compounds, enhancing KPC-2 inhibition. Lead molecule <b>3b</b>, in synergy with Meropenem, achieved a 3-log CFU/mL reduction in bacterial count within 3 h in time-kill kinetics and exhibited a postantibiotic effect of 71 ± 5 min. A nanomolar range inhibition constant (<i>K</i><sub><i>i</i></sub>), a second-order inactivation rate constant (<i>k</i><sub>2</sub>/<i>K</i>) of ∼10<sup>3</sup> M<sup>-1</sup> s<sup>-1</sup>, and a slow off-rate (<i>k</i><sub>off</sub> ∼ 0.0018 s<sup>-1</sup>) were observed. Importantly, the PBA derivatives were nontoxic to human cells and significantly reduced lung bacterial load in a murine pneumonia model. Overall, PBA-based non-β-lactam β-lactamase inhibitors showed promise in restoring carbapenem efficacy against KPC-2-producers.

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Publication Details

Journal
Journal of Medicinal Chemistry
Published
2025-06-27
DOI
https://doi.org/10.1021/acs.jmedchem.5c00058
Citations
1
Primary Topic
Antibiotic Resistance in Bacteria
Type
article
Field-Weighted Citation Impact
0.59
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article

Design and SAR Analysis of Phenylboronic Acid-Based Inhibitors for Sensitizing KPC-2-Producing Klebsiella pneumoniae to β-Lactam Antibiotics

Patrick Ihle, Annette Bayer, Hanna‐Kirsti S. Leiros, Marc Boomgaren et al.
1 citations
Journal of Medicinal Chemistry
Antibiotic Resistance in Bacteria
0.59
article

Design and SAR Analysis of Phenylboronic Acid-Based Inhibitors for Sensitizing KPC-2-Producing Klebsiella pneumoniae to β-Lactam Antibiotics

Patrick Ihle, Annette Bayer, Hanna‐Kirsti S. Leiros, Marc Boomgaren, Ranjana Pathania, Perwez Bakht, Mangal Singh
article en
1 citations

Abstract

The global threat posed by multidrug-resistant bacteria, particularly those producing KPC-2 carbapenemases, has compromised the effectiveness of carbapenems, the last-resort antibiotics. To address this, we utilized a bioisosteric replacement approach to synthesize phenylboronic acid (PBA) derivatives targeting KPC-2. The enzyme kinetics study revealed that electron-withdrawing substituents enhanced the residence time of lead compounds, enhancing KPC-2 inhibition. Lead molecule <b>3b</b>, in synergy with Meropenem, achieved a 3-log CFU/mL reduction in bacterial count within 3 h in time-kill kinetics and exhibited a postantibiotic effect of 71 ± 5 min. A nanomolar range inhibition constant (<i>K</i><sub><i>i</i></sub>), a second-order inactivation rate constant (<i>k</i><sub>2</sub>/<i>K</i>) of ∼10<sup>3</sup> M<sup>-1</sup> s<sup>-1</sup>, and a slow off-rate (<i>k</i><sub>off</sub> ∼ 0.0018 s<sup>-1</sup>) were observed. Importantly, the PBA derivatives were nontoxic to human cells and significantly reduced lung bacterial load in a murine pneumonia model. Overall, PBA-based non-β-lactam β-lactamase inhibitors showed promise in restoring carbapenem efficacy against KPC-2-producers.

Journal of Medicinal ChemistryVol. 68(13)
Indian Institute of Technology Roorkee (IN), Centre for Arctic Gas Hydrate, Environment and Climate (NO)
Openalex Percentile: Top 34%
Antibiotic Resistance in Bacteria
0.59
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Design and SAR Analysis of Phenylboronic Acid-Based Inhibitors for Sensitizing KPC-2-Producing <i>Klebsiella pneumoniae</i> to β-Lactam Antibiotics — Patrick Ihle, Annette Bayer, et al. · Journal of Medicinal Chemistry (2025) | TGRS Research Map | TGRS