A data analysis approach for locomotor behavioral responses in developmentally exposed zebrafish

• The larval zebrafish locomotor response light/ dark assay has been identified as a new approach method for evaluating developmental neurotoxicity potential • A lack of standardized data analysis techniques has limited cross-laboratory data comparisons and data integration • Normalization using a Box-Cox transformation was implemented to address challenges such as inter-fish variability and non-normally distributed data • Biphasic concentration-response modeling and bidirectional curve-fitting were informative for modeling zebrafish behavior • Ten chemicals were identified as only active in the less commonly studied endpoints, suggesting the potential added value of a multi-endpoint suite for detecting complex behavioral profiles The larval zebrafish ( Danio rerio ) locomotor response light/ dark (LMR L/D) assay may inform developmental neurotoxicity (DNT) hazard, but a lack of standardized data analysis techniques has limited cross-laboratory data comparisons and integration. The present work proposes a concentration-response modeling workflow for evaluating chemicals tested in the LMR L/D assay, comprising 13 endpoints measuring different types of behavioral response (habituation, average speed, startle response, and range of activity). Data were previously collected for 61 chemicals tested in the LMR L/D assay, including 47 chemicals with evidence of in vivo DNT and 14 putative negatives. Response values were normalized using a Box-Cox transformation to address challenges such as inter-fish variability and non-normally distributed data. We found that the commonly studied endpoints in the LMR L/D assay (four in this study) were the most active overall; however, we identified ten chemicals that were only active in the less commonly studied endpoints (nine in this study), suggesting the potential added value of these endpoints for detecting behavioral changes in developing zebrafish. Importantly, we found that bidirectional curve-fitting and biphasic concentration-response models were informative for modeling zebrafish behavior, particularly for effects occurring at lower concentrations. This standardized concentration-response modeling workflow for the LMR L/D assay successfully detected chemical-induced changes in zebrafish behavior and contributes to a global effort to increase data transferability, reproducibility, and integration across LMR L/D labs and other DNT assay technologies.

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Publication Details

Journal
NAM journal.
Published
2025-01-01
DOI
https://doi.org/10.1016/j.namjnl.2025.100033
Citations
3
Primary Topic
Zebrafish Biomedical Research Applications
Type
article
Field-Weighted Citation Impact
3.45

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article

A data analysis approach for locomotor behavioral responses in developmentally exposed zebrafish

R. Woodrow Setzer, Katie Paul Friedman, Stephanie Padilla, Kelly E. Carstens et al.
3 citations
NAM journal.
Zebrafish Biomedical Research Applications
3.45
article

A data analysis approach for locomotor behavioral responses in developmentally exposed zebrafish

R. Woodrow Setzer, Katie Paul Friedman, Stephanie Padilla, Kelly E. Carstens, Zachary Rowson
article en
3 citations

Abstract

• The larval zebrafish locomotor response light/ dark assay has been identified as a new approach method for evaluating developmental neurotoxicity potential • A lack of standardized data analysis techniques has limited cross-laboratory data comparisons and data integration • Normalization using a Box-Cox transformation was implemented to address challenges such as inter-fish variability and non-normally distributed data • Biphasic concentration-response modeling and bidirectional curve-fitting were informative for modeling zebrafish behavior • Ten chemicals were identified as only active in the less commonly studied endpoints, suggesting the potential added value of a multi-endpoint suite for detecting complex behavioral profiles The larval zebrafish ( Danio rerio ) locomotor response light/ dark (LMR L/D) assay may inform developmental neurotoxicity (DNT) hazard, but a lack of standardized data analysis techniques has limited cross-laboratory data comparisons and integration. The present work proposes a concentration-response modeling workflow for evaluating chemicals tested in the LMR L/D assay, comprising 13 endpoints measuring different types of behavioral response (habituation, average speed, startle response, and range of activity). Data were previously collected for 61 chemicals tested in the LMR L/D assay, including 47 chemicals with evidence of in vivo DNT and 14 putative negatives. Response values were normalized using a Box-Cox transformation to address challenges such as inter-fish variability and non-normally distributed data. We found that the commonly studied endpoints in the LMR L/D assay (four in this study) were the most active overall; however, we identified ten chemicals that were only active in the less commonly studied endpoints (nine in this study), suggesting the potential added value of these endpoints for detecting behavioral changes in developing zebrafish. Importantly, we found that bidirectional curve-fitting and biphasic concentration-response models were informative for modeling zebrafish behavior, particularly for effects occurring at lower concentrations. This standardized concentration-response modeling workflow for the LMR L/D assay successfully detected chemical-induced changes in zebrafish behavior and contributes to a global effort to increase data transferability, reproducibility, and integration across LMR L/D labs and other DNT assay technologies.

NAM journal.Vol. 1
Oak Ridge Associated Universities (US), Oak Ridge National Laboratory (US), Environmental Protection Agency (US), Research Triangle Park Foundation (US)
U.S. Environmental Protection Agency
Openalex Percentile: Top 8%
Zebrafish Biomedical Research Applications
3.45
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