Genome Mining Leads to the Discovery of Kasichelins A–D, Unusual β-Alanine- and β-Aminoisobutyric Acid-Containing Siderophores from <i>Streptomyces</i>

Genome mining of a <i>Streptomyces</i> strain collected in Tanzania revealed its potential to produce a novel siderophore. Heterologous expression of the corresponding biosynthetic gene cluster (BGC) in <i>S. coelicolor</i> M512 resulted in the production of kasichelin A, a new metal-chelating molecule featuring a phenolate oxazoline and a hydroxamate moiety as iron-binding ligands connected via a β-aminoisobutyric acid (BAIBA) linker. Further analysis of the heterologous producer and subsequent optimization of the culture conditions for the wild-type strain led to the isolation of three additional congeners, kasichelins B, C, and D. Marfey's analysis of kasichelin C, the most abundant congener, established its absolute configuration as 2<i>R</i>,7<i>R</i>,10<i>S</i>,11<i>R.</i> Notably, kasichelin C was found to be identical to L-654,040, a partially characterized compound previously described in the patent literature. The iron-binding properties of the kasichelins were evaluated using the chrome azurol S (CAS) assay, UV/vis spectroscopy, and electrospray ionization-mass spectrometry (ESI-MS). All four kasichelins exhibit comparable iron(III)-binding affinities and surpass deferoxamine in their ability to sequester the metal, despite natural variations in their ligands and linker structures. The biosynthetic origin of the unusual BAIBA moiety presents an intriguing direction for future research.

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Publication Details

Journal
Journal of Natural Products
Published
2025-06-25
DOI
https://doi.org/10.1021/acs.jnatprod.5c00461
Citations
2
Primary Topic
Microbial Natural Products and Biosynthesis
Type
article
Field-Weighted Citation Impact
2.79

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article

Genome Mining Leads to the Discovery of Kasichelins A–D, Unusual β-Alanine- and β-Aminoisobutyric Acid-Containing Siderophores from Streptomyces

Chambers C. Hughes, Leonard Kaysser, Julian C. Schmid, Sehee Jang et al.
2 citations
Journal of Natural Products
Microbial Natural Products and Biosynthesis
2.79
article

Genome Mining Leads to the Discovery of Kasichelins A–D, Unusual β-Alanine- and β-Aminoisobutyric Acid-Containing Siderophores from Streptomyces

Chambers C. Hughes, Leonard Kaysser, Julian C. Schmid, Sehee Jang, Stephanie Grond, Patrik Stange, Marius Bader
article en
2 citations

Abstract

Genome mining of a <i>Streptomyces</i> strain collected in Tanzania revealed its potential to produce a novel siderophore. Heterologous expression of the corresponding biosynthetic gene cluster (BGC) in <i>S. coelicolor</i> M512 resulted in the production of kasichelin A, a new metal-chelating molecule featuring a phenolate oxazoline and a hydroxamate moiety as iron-binding ligands connected via a β-aminoisobutyric acid (BAIBA) linker. Further analysis of the heterologous producer and subsequent optimization of the culture conditions for the wild-type strain led to the isolation of three additional congeners, kasichelins B, C, and D. Marfey's analysis of kasichelin C, the most abundant congener, established its absolute configuration as 2<i>R</i>,7<i>R</i>,10<i>S</i>,11<i>R.</i> Notably, kasichelin C was found to be identical to L-654,040, a partially characterized compound previously described in the patent literature. The iron-binding properties of the kasichelins were evaluated using the chrome azurol S (CAS) assay, UV/vis spectroscopy, and electrospray ionization-mass spectrometry (ESI-MS). All four kasichelins exhibit comparable iron(III)-binding affinities and surpass deferoxamine in their ability to sequester the metal, despite natural variations in their ligands and linker structures. The biosynthetic origin of the unusual BAIBA moiety presents an intriguing direction for future research.

Journal of Natural ProductsVol. 88(7)
German Center for Infection Research (DE), Czech Academy of Sciences, Institute of Microbiology (CZ), Drug Discovery Laboratory (Norway) (NO), Chemical Pharmaceutical Research Institute (BG), University of Tübingen (DE), Leipzig University (DE)
Deutsches Zentrum für Infektionsforschung, Deutsche Forschungsgemeinschaft
Openalex Percentile: Top 10%
Microbial Natural Products and Biosynthesis
2.79
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