The Impact of LoRA Adapters on LLMs for Clinical Text Classification Under Computational and Data Constraints

Fine-tuning Large Language Models (LLMs) for clinical Natural Language Processing (NLP) poses significant challenges due to domain gap, limited data, and stringent hardware constraints. In this study, we evaluate four adapter techniques—Adapter, Lightweight, TinyAttention, and Gated Residual Network (GRN) - equivalent to Low-Rank Adaptation (LoRA), for clinical note classification under real-world, resource-constrained conditions. All experiments were conducted on a single NVIDIA Quadro P620 GPU (2 GB VRAM, 512 CUDA cores, 1.386 TFLOPS FP32), limiting batch sizes to ≤ 8 sequences and maximum sequence length to 256 tokens. Our clinical corpus comprises only 580 000 tokens, several orders of magnitude smaller than standard LLM pre-training datasets. We fine-tuned three biomedical pre-trained LLMs (CamemBERT-bio, AliBERT, DrBERT) and two lightweight Transformer models trained from scratch. Results show that (i) adapter structures provide no consistent gains when fine-tuning biomedical LLMs under these constraints, and (ii) simpler Transformers, with minimal parameter counts and training times under 6 hours, outperform adapter-augmented LLMs, which required over 1000 GPU-hours. Among adapters, GRN achieved the best metrics (accuracy, precision, recall, F1 = 0.88). These findings demonstrate that, in low-resource clinical settings with limited data and compute, lightweight Transformers trained from scratch offer a more practical and efficient solution than large LLMs, while GRN remains a viable adapter choice when minimal adaptation is needed.

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Publication Details

Journal
IEEE Access
Published
2025-01-01
DOI
https://doi.org/10.1109/access.2025.3582037
Citations
2
Primary Topic
Machine Learning in Healthcare
Type
article
Field-Weighted Citation Impact
4.96

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article

The Impact of LoRA Adapters on LLMs for Clinical Text Classification Under Computational and Data Constraints

Philippe Jouvet, Symeon Chatzinotas, Rita Noumeir, Ti Ti Nguyen et al.
2 citations
IEEE Access
Machine Learning in Healthcare
4.96
article

The Impact of LoRA Adapters on LLMs for Clinical Text Classification Under Computational and Data Constraints

Philippe Jouvet, Symeon Chatzinotas, Rita Noumeir, Ti Ti Nguyen, Vu Nguyen Ha, Thanh-Dung Le
article en
2 citations

Abstract

Fine-tuning Large Language Models (LLMs) for clinical Natural Language Processing (NLP) poses significant challenges due to domain gap, limited data, and stringent hardware constraints. In this study, we evaluate four adapter techniques—Adapter, Lightweight, TinyAttention, and Gated Residual Network (GRN) - equivalent to Low-Rank Adaptation (LoRA), for clinical note classification under real-world, resource-constrained conditions. All experiments were conducted on a single NVIDIA Quadro P620 GPU (2 GB VRAM, 512 CUDA cores, 1.386 TFLOPS FP32), limiting batch sizes to ≤ 8 sequences and maximum sequence length to 256 tokens. Our clinical corpus comprises only 580 000 tokens, several orders of magnitude smaller than standard LLM pre-training datasets. We fine-tuned three biomedical pre-trained LLMs (CamemBERT-bio, AliBERT, DrBERT) and two lightweight Transformer models trained from scratch. Results show that (i) adapter structures provide no consistent gains when fine-tuning biomedical LLMs under these constraints, and (ii) simpler Transformers, with minimal parameter counts and training times under 6 hours, outperform adapter-augmented LLMs, which required over 1000 GPU-hours. Among adapters, GRN achieved the best metrics (accuracy, precision, recall, F1 = 0.88). These findings demonstrate that, in low-resource clinical settings with limited data and compute, lightweight Transformers trained from scratch offer a more practical and efficient solution than large LLMs, while GRN remains a viable adapter choice when minimal adaptation is needed.

IEEE AccessVol. 13
University of Luxembourg (LU), Centre Hospitalier Universitaire Sainte-Justine (CA), Laboratoire de traitement de l'information en santé, Université de Montréal (CA), École de Technologie Supérieure (CA)
Université de Montréal, Institut de Valorisation des Données, Fonds de recherche du Québec, Natural Sciences and Engineering Research Council of Canada, Fonds de Recherche du Québec - Santé
Quality Education
Openalex Percentile: Top 5%
Machine Learning in Healthcare
4.96
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