Molecular Evolution of Cytochrome c Oxidase I Marker Encoded Protein Across the Fish Families from The Bay of Bengal, Odisha Coast, India

The BOLD database contains approximately 20.5 million Cytochrome c Oxidase I (COI) barcode sequences belonging to 3.6 lakhs species, among which 2.6 lakhs are animal species, which have made the COI gene fragments of the animal kingdom's most thoroughly sequenced gene area. Additionally, COI barcodes present a distinctive resource for investigating functional limitations on DNA evolution, as the barcode region is situated at the center of cellular energy production, where COI is one of the Cytochrome c Oxidase (COX) protein's building parts. This study has compared the amino acid variations in COI barcode areas across different fish families, as they are the major contributors to the current vertebrate population. The COI sequences produced by the DNA barcoding program in the Bay of Bengal, Gopalpur-on-sea, India, were explored in the present study. Among the families under study, 28 amino acid variations were detected inside the COI barcode sequences. The Sciaenidae family displayed the greatest number of variants among all the families, with variations in the 19 amino acid positions. Overall, these results show DNA barcodes of how the fish species may be used for purposes far beyond taxonomy and identification, followed by a wide range of research.

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Journal
Genetics of Aquatic Organisms
Published
2025-06-02
DOI
https://doi.org/10.4194/ga878
Primary Topic
Identification and Quantification in Food
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article
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article

Molecular Evolution of Cytochrome c Oxidase I Marker Encoded Protein Across the Fish Families from The Bay of Bengal, Odisha Coast, India

Bijayalaxmi Sahu, Amiya Kumar Patel, Tapan Kumar Barik, Raghunath Satpathy
Genetics of Aquatic Organisms
Identification and Quantification in Food
article

Molecular Evolution of Cytochrome c Oxidase I Marker Encoded Protein Across the Fish Families from The Bay of Bengal, Odisha Coast, India

Bijayalaxmi Sahu, Amiya Kumar Patel, Tapan Kumar Barik, Raghunath Satpathy
article en

Abstract

The BOLD database contains approximately 20.5 million Cytochrome c Oxidase I (COI) barcode sequences belonging to 3.6 lakhs species, among which 2.6 lakhs are animal species, which have made the COI gene fragments of the animal kingdom's most thoroughly sequenced gene area. Additionally, COI barcodes present a distinctive resource for investigating functional limitations on DNA evolution, as the barcode region is situated at the center of cellular energy production, where COI is one of the Cytochrome c Oxidase (COX) protein's building parts. This study has compared the amino acid variations in COI barcode areas across different fish families, as they are the major contributors to the current vertebrate population. The COI sequences produced by the DNA barcoding program in the Bay of Bengal, Gopalpur-on-sea, India, were explored in the present study. Among the families under study, 28 amino acid variations were detected inside the COI barcode sequences. The Sciaenidae family displayed the greatest number of variants among all the families, with variations in the 19 amino acid positions. Overall, these results show DNA barcodes of how the fish species may be used for purposes far beyond taxonomy and identification, followed by a wide range of research.

Genetics of Aquatic OrganismsVol. 9(2)
Sambalpur University (IN), Berhampur University (IN)
Openalex Percentile: Top 87%
Identification and Quantification in Food
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