Integrating single-cell RNA-seq, bulk RNA-seq and network pharmacology reveals protective effect of salidroside in peritoneal dialysis-associated peritoneal fibrosis
Salidroside (2- (4-Hydroxyphenyl) ethyl β-D-glucopyranoside, SAL) is a bioactive compound present in Rhodiola rosea L., exhibiting diverse pharmacological properties such as anti-inflammatory and anti-fibrotic effects. Despite its known benefits, the therapeutic potential of SAL in peritoneal dialysis (PD) -induced peritoneal fibrosis remains unexplored. This study aims to investigate the protective effects of SAL in PD-related peritoneal fibrosis and its underlying mechanisms through the integration of single-cell RNA-seq, bulk RNA-seq, and network pharmacology analyses. A total of 249 disease targets were identified through single-cell RNA-seq and bulk RNA-seq analyses. Functional enrichment analysis highlighted the involvement of extracellular matrix organization, neutrophil degranulation, and the vitamin D receptor (VDR) pathway in peritoneal fibrosis. By intersecting 148 drug targets with the 249 disease targets, four therapeutic targets for SAL treatment against peritoneal fibrosis were pinpointed: cathepsin S, VDR, plasminogen activator urokinase, and galectin 3. In a murine model of peritoneal fibrosis induced by intraperitoneal injection of 4.25% PD fluid, SAL treatment significantly mitigated peritoneal fibrosis, as evidenced by reduced collagen deposition, decreased protein expression of α-smooth muscle actin and Collagen I, and a thinner peritoneum. <i>In vitro</i> experiments demonstrated that SAL treatment inhibited extracellular matrix deposition, potentially through upregulation of VDR expression. In conclusion, SAL may target VDR domains as a therapeutic agent for PD-related peritoneal fibrosis. These findings comprehensively identify potential therapeutic targets for SAL in combating peritoneal fibrosis, providing a theoretical basis for the clinical application of SAL in the treatment of peritoneal fibrosis.
Authors
- Siming Zhu (ORCID: https://orcid.org/0000-0002-6112-1493)
- Fenfen Peng (ORCID: https://orcid.org/0000-0003-2737-1971)
- Haibo Long (ORCID: https://orcid.org/0000-0001-6891-8916)
- Min Mo (ORCID: https://orcid.org/0000-0003-1377-143X)
- Yue Ji (ORCID: https://orcid.org/0000-0003-2464-8592)
- Qimei Luo
- Dan Luo (ORCID: https://orcid.org/0000-0003-1833-0035)
- Shuting Li (ORCID: https://orcid.org/0000-0003-3438-1588)
- Mi Liu (ORCID: https://orcid.org/0000-0003-4026-7255)
- Zhanjun Jia (ORCID: https://orcid.org/0000-0002-8282-1587)
- Xianrui Dou
Institutions
- The First People's Hospital of Shunde (CN)
- Zhujiang Hospital (CN)
- Second Affiliated Hospital of Nanjing Medical University (CN)
- Southern Medical University (CN)
Publication Details
- Journal
- Frontiers in Pharmacology
- Published
- 2025-06-20
- DOI
- https://doi.org/10.3389/fphar.2025.1558366
- Primary Topic
- Medicinal Plants and Bioactive Compounds
- Type
- article
- Field-Weighted Citation Impact
- 0.00
Funders
- Natural Science Foundation of Guangdong Province
- Southern Medical University
- Basic and Applied Basic Research Foundation of Guangdong Province