Avian Influenza Virus: Comparative Evolution as the Key for Predicting Host Tropism Expansion

The avian influenza virus poses an emerging public health risk due to its ability to cross the species barrier and infect a broad spectrum of hosts, including humans. The aim of this study was to investigate the molecular mechanisms and evolutionary dynamics underlying the spillover, using a bioinformatics approach to viral sequences. Eight viral proteins involved in the process of adaptation to new hosts were selected, and 156 amino acid mutations potentially associated with interspecies transmission were analyzed. The sequences, obtained from the NCBI Virus database, were aligned with the BLASTP1.4.0 tool and compared through phylogenetic analysis. The results show significant evolutionary proximity between human and animal viral strains, and the identification of shared mutations suggests the presence of conserved mechanisms in spillover. The identification of hosts that share mutations with human strains highlights the potential role of these animals as reservoirs or vectors. This study contributes to the understanding of viral adaptation and provides a starting point for targeted preventive strategies, including molecular surveillance and the development of containment and prevention measures.

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Publication Details

Journal
Pathogens
Published
2025-06-20
DOI
https://doi.org/10.3390/pathogens14070608
Citations
1
Primary Topic
Influenza Virus Research Studies
Type
article
Field-Weighted Citation Impact
1.35
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Avian Influenza Virus: Comparative Evolution as the Key for Predicting Host Tropism Expansion

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Avian Influenza Virus: Comparative Evolution as the Key for Predicting Host Tropism Expansion

Carlotta Ceniti, Matteo Cataldi, Bruno Tilocca, Luca Borrelli, Matteo Mellace
article en
1 citations

Abstract

The avian influenza virus poses an emerging public health risk due to its ability to cross the species barrier and infect a broad spectrum of hosts, including humans. The aim of this study was to investigate the molecular mechanisms and evolutionary dynamics underlying the spillover, using a bioinformatics approach to viral sequences. Eight viral proteins involved in the process of adaptation to new hosts were selected, and 156 amino acid mutations potentially associated with interspecies transmission were analyzed. The sequences, obtained from the NCBI Virus database, were aligned with the BLASTP1.4.0 tool and compared through phylogenetic analysis. The results show significant evolutionary proximity between human and animal viral strains, and the identification of shared mutations suggests the presence of conserved mechanisms in spillover. The identification of hosts that share mutations with human strains highlights the potential role of these animals as reservoirs or vectors. This study contributes to the understanding of viral adaptation and provides a starting point for targeted preventive strategies, including molecular surveillance and the development of containment and prevention measures.

PathogensVol. 14(7)
University of Sassari (IT), Magna Graecia University (IT)
Openalex Percentile: Top 18%
Influenza Virus Research Studies
1.35
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Avian Influenza Virus: Comparative Evolution as the Key for Predicting Host Tropism Expansion — Carlotta Ceniti, Matteo Cataldi, et al. · Pathogens (2025) | TGRS Research Map | TGRS