Substring Counting with Insertions

Substring counting is a classical algorithmic problem with numerous solutions that achieve linear time complexity. In this paper, we address a variation of the problem where, given three strings p, t, and s, we are interested in the number of occurrences of p in all strings that would result from inserting t into s at every possible position. Essentially, we are solving several substring counting problems of the same substring p in related strings. We give a detailed description of several conceptually different approaches to solving this problem and conclude with an algorithm that has a linear time complexity. The solution is based on a recent result from the field of substring search in compressed sequences and exploits the periodicity of strings. We also provide a self-contained implementation of the algorithm in C++ and experimentally verify its behavior, chiefly to demonstrate that its running time is linear in the lengths of all three input strings.

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Publication Details

Journal
Algorithms
Published
2025-06-19
DOI
https://doi.org/10.3390/a18060371
Primary Topic
Algorithms and Data Compression
Type
article
Field-Weighted Citation Impact
0.00

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article

Substring Counting with Insertions

Janez Brank, Tomaž Hočevar
Algorithms
Algorithms and Data Compression
article

Substring Counting with Insertions

Janez Brank, Tomaž Hočevar
article en

Abstract

Substring counting is a classical algorithmic problem with numerous solutions that achieve linear time complexity. In this paper, we address a variation of the problem where, given three strings p, t, and s, we are interested in the number of occurrences of p in all strings that would result from inserting t into s at every possible position. Essentially, we are solving several substring counting problems of the same substring p in related strings. We give a detailed description of several conceptually different approaches to solving this problem and conclude with an algorithm that has a linear time complexity. The solution is based on a recent result from the field of substring search in compressed sequences and exploits the periodicity of strings. We also provide a self-contained implementation of the algorithm in C++ and experimentally verify its behavior, chiefly to demonstrate that its running time is linear in the lengths of all three input strings.

AlgorithmsVol. 18(6)
University of Ljubljana (SI), Jožef Stefan Institute (SI)
Javna Agencija za Raziskovalno Dejavnost RS
Openalex Percentile: Top 93%
Algorithms and Data Compression
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Substring Counting with Insertions — Janez Brank, Tomaž Hočevar · Algorithms (2025) | TGRS Research Map | TGRS