Unique structural features define the decarboxylation activity of a CYP152 fatty acid decarboxylase from Lacicoccus alkaliphilus
Cytochrome P450 CYP152s catalyze decarboxylation of fatty acids to generate terminal alkenes, valuable compounds for various industries. Here, we identified, overexpressed, and characterized a new CYP152 enzyme from Lacicoccus alkaliphilus (OleT<sub>LA</sub>) and compared its biophysical and biochemical properties with the well-studied OleT<sub>JE</sub> from Jeotgalicoccus sp. 8456. Improved expression protocols gave the highest yields of CYP152 holoenzymes reported to date. OleT<sub>LA</sub> exhibits twice the catalytic turnover number of OleT<sub>JE</sub> when using hexadecanoic acid and H<sub>2</sub>O<sub>2</sub> as substrates in 10% (v/v) ethanol (EtOH). The X-ray structure of OleT<sub>LA</sub> in complex with icosanoic acid revealed a unique flipped heme and a substrate tunnel configuration which are different than those of other CYP152 decarboxylases. Molecular dynamics simulations revealed that in the presence of EtOH, OleT<sub>LA</sub> displays structural dynamics which maintain structural interactions better than those of OleT<sub>JE</sub>. As I178 in OleT<sub>LA</sub> (equivalent to L176 in OleT<sub>JE</sub>) shows close interactions with its substrate during simulations, I178L of OleT<sub>LA</sub> and L176I of OleT<sub>JE</sub> variants were constructed and investigated for their activities. While L176I in OleT<sub>JE</sub> caused a significant loss of activity, I178L of OleT<sub>LA</sub> had activities that were equivalent to or greater than those of the wild-type enzyme, suggesting that overall scaffold of OleT<sub>LA</sub> is more amenable to mutation than OleT<sub>JE</sub>. Stopped-flow investigations of OleT<sub>LA</sub> reactions indicated that EtOH increases the rate constant of Compound I formation. We also identified a new redox partner system, ferredoxin and ferredoxin reductase that can function as effective electron donors for both in vitro and in vivo systems of CYP152s.
Authors
- Pimchai Chaiyen (ORCID: https://orcid.org/0000-0002-8533-1604)
- Narin Lawan (ORCID: https://orcid.org/0000-0003-0940-9278)
- Genji Kurisu (ORCID: https://orcid.org/0000-0002-5354-0807)
- Jeerus Sucharitakul (ORCID: https://orcid.org/0000-0002-3834-7961)
- Suppalak Phaisan (ORCID: https://orcid.org/0000-0001-6564-7620)
- Ailada Charoenpol (ORCID: https://orcid.org/0009-0008-1751-9112)
- Pratchaya Watthaisong (ORCID: https://orcid.org/0000-0001-7340-7715)
- Aisaraphon Phintha (ORCID: https://orcid.org/0000-0001-6565-998X)
- Duangthip Trisrivirat (ORCID: https://orcid.org/0000-0003-0079-4739)
- Hideaki Tanaka (ORCID: https://orcid.org/0000-0003-2035-954X)
Institutions
- Chulalongkorn University (TH)
- Technopolis (Finland) (FI)
- KAN Research Institute (JP)
- Protein Research Foundation (JP)
- Vidyasirimedhi Institute of Science and Technology (TH)
- Chiang Mai University (TH)
- The University of Osaka (JP)
Publication Details
- Journal
- Journal of Biological Chemistry
- Published
- 2025-06-19
- DOI
- https://doi.org/10.1016/j.jbc.2025.110397
- Citations
- 2
- Primary Topic
- Microbial Metabolic Engineering and Bioproduction
- Type
- article
- Field-Weighted Citation Impact
- 1.61